Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00442 ATGAAAGCAAAGAACCTTCCTGCTTTGAATCTACTCTCTCAACAACTTTCTTACCGTAATTCTCACCTCACCATGGAAGAAATTCCAACCTTTCTAAACTCCAGTGTGATGAAGAATGTTCCTGTGACGAATAACGAGAACAAAGGTTCACAGTTGACAATCTTCTATGGCGGTCAAGTTATAGTGTTCGATGATATTGAAGCGGAGAAAGTGAAAGAGATGATGTGTCTTGCAAGCAAAGGTTCATCATCAACGATCTCGCAATCAAACCATCACAAAAACAATATCAATATCAATAACAATAATTACGGTTACAGAGTGGCTCGGCGATGTTCATTTCCTTCGCTACCTAATGATGTGGTTCGGAATAGAAGTTCTTGTGTTGCTCCTCCAACTTCTCCGTTTCCTTTTATGATTCCTGCTACCATTCCCAACAATTCGGTTAAGGATCAGCACCCTCAACCACCTTCCAGATCCGTTGTTTCTGATCTACCACTTGCTAGGAAAGCTTCACTACACCGATTCTTGGAGAAGAGAAAGGATAGAATTGCTGCGAGAGCACCATATCAAACAAGCAGCCCCATGTCATGGCTTTCCATGGTAGTTAGATCACCACAAGAGAATTCTGAGACTAGCTCCAGTGTAGTGTAA 651 0.4178 MKAKNLPALNLLSQQLSYRNSHLTMEEIPTFLNSSVMKNVPVTNNENKGSQLTIFYGGQVIVFDDIEAEKVKEMMCLASKGSSSTISQSNHHKNNININNNNYGYRVARRCSFPSLPNDVVRNRSSCVAPPTSPFPFMIPATIPNNSVKDQHPQPPSRSVVSDLPLARKASLHRFLEKRKDRIAARAPYQTSSPMSWLSMVVRSPQENSETSSSVV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00442 216 Pfam tify domain 48 79 IPR010399 -
Aip05g00442 216 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 22 209 IPR040390 -
Aip05g00442 216 Pfam Jas motif 165 190 IPR018467 -
Aip05g00442 216 ProSiteProfiles Tify domain profile. 45 80 IPR010399 -
Aip05g00442 216 MobiDBLite consensus disorder prediction 197 216 - -
Aip05g00442 216 PANTHER PROTEIN TIFY 10A-LIKE 22 209 - -
Aip05g00442 216 SMART tify_2 45 80 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00442 Aip-Chr5 4999174 5000325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00442 46 202 Tify Gene Family AT1G19180 35.088 6.01e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip05g00442 tify 9.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00442 K13464 - gmx:100306332 162.54