Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00435 ATGGATCTTGTTCTTCCAGTTTGCAAAGCCAAAGCTTCAAGTGGCTGTTTCGCCTTAGTTTTCGTTTTACAGAGCACAAGCTTCTCTCGACCAAAGGCTGATCGATTTTTGCTCTGCTTCTTGCATTTCCTAAGGATGGCTGCATCTGTAAGTAATGGTTTTGAGAAGGCCTTGAGGGAAAATGGGGATTGCAAATTTCATGCCCCGTCTGAGTACAAGCGACGTAAAGTTTCTGCTGTTCGTGATTTCCCTGAAGGATGTGGACCGTTTGCTCCAAGGATTGAAGCAGTTTTAAAGTGTGAGGACAATAGCCAGCATCCTGAGTTACATGCCAAAACTCTTGTCCAAACTACTGATTGCAGTTTGAATAAGGAAAATCCAGTCATCTCATCTGATCAAGTGGATAGGCCTCCTCTGGTAAATGACGAACCTGCAAAAATGTTGCTGGCAGACATGGAAGCTTTGGCAGATACAGAGTCTGGAAGAGCTGTGAAGTTGTCTTCTCCAGTTGGTGAGGTGGCTGGTTCCAGTGCTTGGACGGAGAATATGCTAACTAGAAGCTATTTTCCTCGAAGGAAAGTTTCAGCTATTAGAGACTTTCCTGCTTTATGTGGACGCAATGCTCCATCTTTGCTGAATGAAAATAGAGGGGTTGAACAGAACATGACTGTAAATAATGACCACTTGAAAAAAGTAGCTGCCACTGAAATGAAGGAAGCTGAAAATAATGCTCAAGATGATTCTCGCAAGAGAAAGCTTGTGGACATAGTTTTAGCTGATTCTGAAGGGAATGCTACAGAGAATGTGGATAAGCAGGATGTATGTGAACCACCTATTGGGATAAATAAGCAACACAAAAACCCCAGAGAAAAGAAAATTGAACTTCCTACAGAGATTGATCATCATCAGGCTGAAATAAATTCTGGTGAAGCAGAAAATGAGGATGCTATACCAGTTGAGAAGACATTAGGAATGGAAATTATAGTGTACCCTGAAGTCCAGGCTCTTGAGGCAAAGCCTTTGCGGGCTGTATCAAACAGGAAAGTAGTGCTAGCGTTGAAGTCTGGGTCAGAATGTTTTCTGAGGTCTAATAATGGTCCCTTCAAATTTAAAAGTATTGATGGTGCAAAGGAAAGCAAAGGAAAGAAAGATGATGTCTTGGTACGGCTTGGCAGGACTAAGACTGCTACCAGGACTAAAGATGGCATACATAATTCTAGGTTGAAGCCTCTGAAGAAGAAAAAGGAAAATGCTGCTTCCCATGACAGAGGTCAGTTAGAAATTTTGGACAAGGATTGTGTTGATCCTAATCAAAATGGTGCGGACTTTCAAACTGTCACAAAACCATGTAGTTTCAATGTCAATGTTCCTCCTTTTGGTCATAGTAAGTTGAGTGATAATGAGAATGACTCAAATGTTACTAGACATAAAGTGCGGGAAACACTACGACTTTTTCAAGCTGTTTCTAGAAAGCTTTTGCAGGAACTAGAAGCAAAGAATGAGAGGGGAAGGGTTGACTTACTAGCAGCAAAGGTCCTTAAGGAGAAGGGGAAATATGTTAATGAAGGTAAGCAGATCTTGGGATCTGTACCTGGGATTGAAGTTGGTGATGAATTTCAGTATAGAATTGAGCTTAATATAGTTGGCCTTCATCGCCAAATTCAGGGCGGTATAGATTATGTGAAGCACAGTGGTAAGATTCTTGCAACAAGTATTGTTGCATCGGGAGGCTATGCTGATGATTTGGATAATTCAGATGTATTGATATATACAGGACAAGGTGGTAATGTGATGAACTCTGACAAACAACCTGAAGATCAGAAGCTTGAACGGGGAAATCTTGCTTTGAAGAATAGTAATGACGAACAGAACCCTGTTAGGGTGATTAGAGGTGCTGACTCAACAGATGGAAAGTCCAAGACGTATGTCTATGATGGACTCTATCTGGTTGAGGCATGTTGGCAGGATATGGGGCCACATGGGAAGCTGGTATATAAGTTTCGGTTGCGAAGAATCTCTGGTCAACCAGAGCTTCCTTTGAAGGAATTGAAGAAATCTAAGAAGTTCAAAATGAGAGAAGGTCTATGTGTTAATGATATTTCTTATGGGAAAGAGCGAATTCCAGTATGTGCTGTGAATGTCAGAGATGATGAAAAACCCCCACCTTTTAAATACATAACCAGCATGATTTATCCTGATTGTGATCTCATTCCTGCAGAAGGATGTGGTTGCATTAATGGTTGTTCTGAGTTGAGATGTTCTTGTGTAGCCAAGAATGGGGGTGAAATCCCATACAATCACAATGGGGCTATTGTAGAAGCAAAGCCTCTAGTTTTTGAGTGTGGACCTTCTTGCAAGTGCCCTCCAACTTGCTATAACAGAGTCAGTCAACATGGCATAAAATTTCAACTTGAAATTTTTAAAACCAGTACAAGGGGATGGGGAGTGAGATCCCTAAATTCCATTCCTTCAGGGAGTTTTATATGTGAATATATAGGAGAGCTTCTCGAAGATAAGGAAGCAGAACAAAGAACTGGTAATGATGAGTATCTTTTCGATATTGGAAATAACTATACAAACAATACTCTTTGGGACGGACTTTCGAACCTTATGCCTGATGCACAGTCAAGTTCTGGCGGGGTTTTGATGGATGGTTGTGGCTTCACCATTGATGCTGCACAGTATGGTAATGTGGGGAGATTCATCAACCACAGTTGTTCTCCAAATCTGTATGCTCAAAACGTGCTGTATGACCATCATGACAAAAGGATGCCTCACATAATGTTCTTTGCTGCTGAGAACATTCCTCCCCTTCAAGAGCTGGCGTATGACTACAACTACATGATCGACCAGGTCCACGACTCCGATGGCAATATAAAACGGAAAGATTGCTACTGCGGTTCTGTGGAATGTACAGGTAGGATGTACTGA 2931 0.4159 MDLVLPVCKAKASSGCFALVFVLQSTSFSRPKADRFLLCFLHFLRMAASVSNGFEKALRENGDCKFHAPSEYKRRKVSAVRDFPEGCGPFAPRIEAVLKCEDNSQHPELHAKTLVQTTDCSLNKENPVISSDQVDRPPLVNDEPAKMLLADMEALADTESGRAVKLSSPVGEVAGSSAWTENMLTRSYFPRRKVSAIRDFPALCGRNAPSLLNENRGVEQNMTVNNDHLKKVAATEMKEAENNAQDDSRKRKLVDIVLADSEGNATENVDKQDVCEPPIGINKQHKNPREKKIELPTEIDHHQAEINSGEAENEDAIPVEKTLGMEIIVYPEVQALEAKPLRAVSNRKVVLALKSGSECFLRSNNGPFKFKSIDGAKESKGKKDDVLVRLGRTKTATRTKDGIHNSRLKPLKKKKENAASHDRGQLEILDKDCVDPNQNGADFQTVTKPCSFNVNVPPFGHSKLSDNENDSNVTRHKVRETLRLFQAVSRKLLQELEAKNERGRVDLLAAKVLKEKGKYVNEGKQILGSVPGIEVGDEFQYRIELNIVGLHRQIQGGIDYVKHSGKILATSIVASGGYADDLDNSDVLIYTGQGGNVMNSDKQPEDQKLERGNLALKNSNDEQNPVRVIRGADSTDGKSKTYVYDGLYLVEACWQDMGPHGKLVYKFRLRRISGQPELPLKELKKSKKFKMREGLCVNDISYGKERIPVCAVNVRDDEKPPPFKYITSMIYPDCDLIPAEGCGCINGCSELRCSCVAKNGGEIPYNHNGAIVEAKPLVFECGPSCKCPPTCYNRVSQHGIKFQLEIFKTSTRGWGVRSLNSIPSGSFICEYIGELLEDKEAEQRTGNDEYLFDIGNNYTNNTLWDGLSNLMPDAQSSSGGVLMDGCGFTIDAAQYGNVGRFINHSCSPNLYAQNVLYDHHDKRMPHIMFFAAENIPPLQELAYDYNYMIDQVHDSDGNIKRKDCYCGSVECTGRMY 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00435 976 SMART G9a_1 523 675 IPR003105 -
Aip05g00435 976 Pfam SET domain 813 946 IPR001214 GO:0005515
Aip05g00435 976 Gene3D - 509 691 IPR036987 -
Aip05g00435 976 Coils Coil 230 250 - -
Aip05g00435 976 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 414 975 - -
Aip05g00435 976 SMART PostSET_3 960 976 IPR003616 -
Aip05g00435 976 ProSiteProfiles YDG domain profile. 528 671 IPR003105 -
Aip05g00435 976 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 378 976 IPR025794 GO:0016571
Aip05g00435 976 Pfam SAD/SRA domain 527 675 IPR003105 -
Aip05g00435 976 Pfam Pre-SET motif 700 794 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip05g00435 976 Gene3D SET domain 692 976 IPR046341 -
Aip05g00435 976 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 414 975 - -
Aip05g00435 976 SUPERFAMILY PUA domain-like 510 684 IPR015947 -
Aip05g00435 976 ProSiteProfiles Post-SET domain profile. 960 976 IPR003616 -
Aip05g00435 976 ProSiteProfiles Pre-SET domain profile. 740 799 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip05g00435 976 SMART preset_2 697 786 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip05g00435 976 SMART set_7 802 952 IPR001214 GO:0005515
Aip05g00435 976 CDD SET_AtSUVH-like 721 947 - -
Aip05g00435 976 ProSiteProfiles SET domain profile. 802 946 IPR001214 GO:0005515
Aip05g00435 976 SUPERFAMILY SET domain 687 947 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00435 Aip-Chr5 4923112 4927098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00435 464 973 Su(var)3-9 homologs AT5G04940 41.165 6.46e-115 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip05g00435 SAD_SRA 7e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00435 K11420 - gmx:100803378 1054.28