Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00431 ATGACTACTCCCGCCGCTGCATCTGCCTCCCCTCTCATCTCCGTCAGTCCCGATGAACTCAGGTTCCCTTTTGAGCTGGAGAAGCAATCATTTTGTGATCTTAAAGTTGTGAATAACACAGAGAACTATGTTGCTTTCAAGGTCAAGACCACTTCGCCAAAGAAGTACTTTGTACGGCCTAACACTGGTGTTATACAGCCCTGGGACTCGTGTATCATCAGAGTCACTCTTCAAGCCCAACGTGAATACCCTCCAGACATGCAATGCAAGGACAAGTTTCTACTACAGAGCACAGTAGTGAATCCAAATACTGATGTTGATGATCTTCCTGCAGATACTTTTAATAAGGAAAGTGGAAATACAATAGAAGAGTTGAAACTAAGAGTTGCGTATATTGCTTCTAACTTAACCCAAGGAAGCTCTGAAGATGATGCATTGAAGAACTCCGCACAAAAACTTGATAGTTCTTATAATCAGGCTTTACAGCAGCTGAAGGAAGAAAGAGATGCCGCCCTGAGACAAACACGACAGCTGCAACAGGAACTGGACATGCTGAAAAGGCGAAAAAGCCAAAGAGGAGATCCTGGCTTTTCCCTTATCTTTGCCTTTTTTGTAGGTCTCATTGGACTTGTGCTTGGCTTTCTTTTAAAACTTCTATTCTCTTCACCACCACCATCACTATCACCATCTACGGAATGA 699 0.4335 MTTPAAASASPLISVSPDELRFPFELEKQSFCDLKVVNNTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTVVNPNTDVDDLPADTFNKESGNTIEELKLRVAYIASNLTQGSSEDDALKNSAQKLDSSYNQALQQLKEERDAALRQTRQLQQELDMLKRRKSQRGDPGFSLIFAFFVGLIGLVLGFLLKLLFSSPPPSLSPSTE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00431 232 ProSiteProfiles Major sperm protein (MSP) domain profile. 12 132 IPR000535 -
Aip05g00431 232 SUPERFAMILY PapD-like 6 139 IPR008962 -
Aip05g00431 232 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 9 223 IPR016763 GO:0005789
Aip05g00431 232 Gene3D Immunoglobulins 6 135 IPR013783 -
Aip05g00431 232 PIRSF VAMP_assoc_prot 5 159 IPR016763 GO:0005789
Aip05g00431 232 PIRSF VAMP_assoc_prot 133 218 IPR016763 GO:0005789
Aip05g00431 232 Coils Coil 147 188 - -
Aip05g00431 232 Pfam MSP (Major sperm protein) domain 13 116 IPR000535 -
Aip05g00431 232 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 9 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00431 Aip-Chr5 4865081 4868861 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00431 - - aprc:113869624 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00431 05 4865081 4868861 Aip05g00431 05 4865081 4868861 ECH
Aip01g01436 01 45594082 45616029 Aip05g00431 05 4865081 4868861 PCT