Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00418 ATGGCTTCAGCAACCTTTTTCATGGCTTCCCTTCTCTTTCTTCACATGACACTAGCCTTTGCCAACATTACCATAAATTCAACACTCTCCACCACCAACAACAACAATGCATGGCGTTCACCTTCAGGTGAATTTGCTTTTGGATTTCACCAACTCAAAGACACAAATCTCTTCATAGTTGCCATATGGTACGACAAAATACCAGAAAAAACCATAGTTTGGAGTTCATATTCACTCAGCAATCCAACACCAACAGGATCAAAGATTCAGTTAACACCAACAGGTCTAAAACTAACAACTCCCAACGGTGAATCCACATGGATAGCACAAACCAACAACCCTCTTTCCCATGGTTCTATGCTTGACACTGGAAACTTTGTTCTTGCAAGCAGTGATAACAAGAAACTTTTGTGGCAAAGTTTCAAGAACCCCACAGATACTTTGTTGCCAAACCAAACTCTTGAATCTGATGCCACTCTCACTTCTAGATTGACTGATACAAACTACACAAGAGGGAGGTTTCAATTCTATTTTCAGAATGACACCATCATGTTAAGTCCTCTAGCATGGCCTACCGAATTTCGCTATGATAATTACGATGTTTTCGGACATGCTGCACGCTTGGTGTTTGATGAAAGTGGTGAGATATATCTGGAGACAGAGAATGGTAATAGAACAACACCACAAGCTCCTAAATGGCAACCCAACTTAGCTCTTGATCCTAGGAACAATTACTATAGAGCTACACTTGATTACTTTGGAGTTTTGACTCAATATGTTCATCCAAAGGACTCAAATTCTCAGCAAGGGTGGAGAGTTTTAAGGTACACTCCTAGTAACATTTGCACAAGTATTTTCAATGATTATGGAAGTGGTGCTTGTGGTTACAATAGCTATTGCTCCATGGAAGAACAGAGGCCTACTTGCAATTGCCCTGATGGGTATACTCTGATTGATCCAAGCAATGTTTTTGGTGGATGCCAACCGAATTTCACTCTTGGTGGTTGCGGAGCAGATAATTATGGCGAAGAATTGCAAGCGCGCCCAGAAGATCTATATAATTTTAGTGTTTTGAGTGATGTGGATTTTCCTCTTAATGATTATGAGCAGATTCAACCTTACTCTCAAGATGAGTGCCAACAAGATTGTTTACATGATTGCAATTGTGCTGTTGCAATCTATACCAACAATCAAACCTGTTGGAAGAAGAGGTTGCCTCTTTCTAACGGAAGAGCACAAAGTGGAGGCCAAACAATACTTATCAAAACAAGAGTTGCACCTCTTGGCATTCCCACTGGTGCTGAATCAAAGAAAGATCATAATAAGATTAAGCCAGGTTTTCATGGATTACTTATTGGATCGCTTGTCATCAATGTTGTACTCCTGGCTGCAGTTCTTTTGGCTTTTCACCTGAAGAAGCGAAAAAGGGACATCAAAGTCTCAAGTCTTCTAGAAACAAATCTGCATTCTTTTAGCTATGAAGCACTGAATGTTGCGACACGGGAGTTTAGCGAAGAACTGGGAAGGGGTTCCTTTGGCATTGTTTACAAAGGAACCATAGAATCAAGGTTTTATAATGTGGTGGCAGTCAAGAAGCTTGACAGATTGGCACAAGAAGGAGAGAAGGAATTCAAGGCTGAGTTGAGTGCCATTGGTAAAACCTGCCACAAGAATCTGGTAAGGTTGATTGGATTCTGTGATGAGGGAACTAACAGAATGCTTGTCTATGAGTTCATGAGCAAAGGTGCTCTGGCAAACTTCCTATTTGGACAAACCAAACCCATTTGGGATCTCAGGGTAAGGTTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTGCATGAAGAGTGTGACACTCCCATCATTCATTGTGACATAAAACCTCAGAATATACTCATAGATGATAACTTCAATGCAAAGATATCTGACTTCGGGTTGGCCAAGTTGTTGTTGTCTGATCAGAGCAGGACCAACACCATGATCCGAGGAACAAGAGGTTATGTTGCTCCGGAATGGTTCAGGAATGTTCCTGTGACGGTTAAGGTGGATGTTTATAGCTTCGGTGTTATGTTACTAGAGATCATTTGCTGCAGAAGGAGTGTGCTGATGTTGGAGTCCGGGGAGGAAGAGAAGGCTGTGCTGACTGATTGGGCTTATGATTGCTTTGTAGAAAGGAGAATAGATGCTTTGGTGGATGATGATACGGAGGCTATAGCTGACAGTGGAAGGTTACAAAGGTGGGTGAAGATAGCAATTTGGTGCATTCAAGAGCATCATGAAATGAGGCCAACAATGGGGATTGTGTTGCAAATGCTTGAAGGCTTGGTTGAAGTCTCCAATCCACCATCACCCTTTTCTTTAAATCCAGTTTCTTCACTGCCACACAGCCAAGAACCATAA 2400 0.4179 MASATFFMASLLFLHMTLAFANITINSTLSTTNNNNAWRSPSGEFAFGFHQLKDTNLFIVAIWYDKIPEKTIVWSSYSLSNPTPTGSKIQLTPTGLKLTTPNGESTWIAQTNNPLSHGSMLDTGNFVLASSDNKKLLWQSFKNPTDTLLPNQTLESDATLTSRLTDTNYTRGRFQFYFQNDTIMLSPLAWPTEFRYDNYDVFGHAARLVFDESGEIYLETENGNRTTPQAPKWQPNLALDPRNNYYRATLDYFGVLTQYVHPKDSNSQQGWRVLRYTPSNICTSIFNDYGSGACGYNSYCSMEEQRPTCNCPDGYTLIDPSNVFGGCQPNFTLGGCGADNYGEELQARPEDLYNFSVLSDVDFPLNDYEQIQPYSQDECQQDCLHDCNCAVAIYTNNQTCWKKRLPLSNGRAQSGGQTILIKTRVAPLGIPTGAESKKDHNKIKPGFHGLLIGSLVINVVLLAAVLLAFHLKKRKRDIKVSSLLETNLHSFSYEALNVATREFSEELGRGSFGIVYKGTIESRFYNVVAVKKLDRLAQEGEKEFKAELSAIGKTCHKNLVRLIGFCDEGTNRMLVYEFMSKGALANFLFGQTKPIWDLRVRFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDNFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSFGVMLLEIICCRRSVLMLESGEEEKAVLTDWAYDCFVERRIDALVDDDTEAIADSGRLQRWVKIAIWCIQEHHEMRPTMGIVLQMLEGLVEVSNPPSPFSLNPVSSLPHSQEP 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00418 799 SMART serkin_6 501 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00418 799 CDD STKc_IRAK 507 775 - -
Aip05g00418 799 Pfam D-mannose binding lectin 83 159 IPR001480 -
Aip05g00418 799 Gene3D - 22 142 IPR036426 -
Aip05g00418 799 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Aip05g00418 799 Gene3D Transferase(Phosphotransferase) domain 1 579 779 - -
Aip05g00418 799 ProSiteProfiles Protein kinase domain profile. 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00418 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 184 IPR036426 -
Aip05g00418 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Aip05g00418 799 Pfam Protein kinase domain 503 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00418 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Aip05g00418 799 Pfam PAN-like domain 355 401 IPR003609 -
Aip05g00418 799 SMART blect_4 29 144 IPR001480 -
Aip05g00418 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 788 - -
Aip05g00418 799 SUPERFAMILY Protein kinase-like (PK-like) 478 773 IPR011009 -
Aip05g00418 799 CDD PAN_AP_plant 355 423 - -
Aip05g00418 799 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 788 - -
Aip05g00418 799 ProSiteProfiles PAN/Apple domain profile. 336 426 IPR003609 -
Aip05g00418 799 Gene3D Hepatocyte Growth Factor 354 419 - -
Aip05g00418 799 ProSitePatterns Protein kinases ATP-binding region signature. 507 532 IPR017441 GO:0005524
Aip05g00418 799 Gene3D Phosphorylase Kinase; domain 1 465 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00418 Aip-Chr5 4731552 4733983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00418 489 784 Glycoside Hydrolase AT3G07070 42.038 2.24e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip05g00418 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00418 - - gmx:100775269 1013.83