Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00414 ATGGCGAACCCAGCTGAACTTTCTGCCCTCAATCAAATCAAAATTCATCTTCTTGGAGAACTCTCACCACTTCCTCATAACTCTTCCTTCTCCTTCCAATTTTACCAAACTAACCCTGCTACTTCTTCTTCTTCCTCCTCCTCCTCCTCTTCCTCTGCTTCGGTCAACCAATACTTTAACTGCAATGAAGTGGTCAACAACCTAGAAACGCCAAGATCCAAACCGCACTCATCGGCGTCTTCGTCGAACCGAAAACCGTCTCTGCAAATCTCTCTCCCTAAGAAAACCGAATGGATCCAATTCGGGGAGGAGAAGGAGATTTCCAAGAGCAGCGAACAACAGAAGAAGAAGCACTACAGAGGGGTAAGACAGAGACCGTGGGGAAAGTACGCCGCCGAGATTCGAGATCCTAACAAGCGAGGCTCCAGAGTCTGGCTTGGAACATTCGACACCGCCATCGATGCCGCCAAGGCTTACGACCGCGCCGCCTTTAAGCTCCGCGGCTCAAAAGCCATCCTCAACTTCCCTCTCGAAGCCGGCGCCGATGACAGGAAGCGCCCCCGTCAAGAGGAGGAGGTGGAGGAGAAGCCGGTCGTCAAGAAGGAGAAGACGGAGGAATCATCTGACGTTAGTGGTGTAAGAGATATTCCGTTAACGCCGTCTAGTTGGACTGGCTTTTGGGACGCTGACGTAACTGGTATTTTCAGTGTGCCACCGTTATCGCCGTTATCTCCCCTCCCGGCGTTGGGATTTCCACAGCTTATGGTTGTGTGA 774 0.5168 MANPAELSALNQIKIHLLGELSPLPHNSSFSFQFYQTNPATSSSSSSSSSSSASVNQYFNCNEVVNNLETPRSKPHSSASSSNRKPSLQISLPKKTEWIQFGEEKEISKSSEQQKKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIDAAKAYDRAAFKLRGSKAILNFPLEAGADDRKRPRQEEEVEEKPVVKKEKTEESSDVSGVRDIPLTPSSWTGFWDADVTGIFSVPPLSPLSPLPALGFPQLMVV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00414 257 Gene3D AP2/ERF domain 117 178 IPR036955 GO:0003700|GO:0006355
Aip05g00414 257 MobiDBLite consensus disorder prediction 182 216 - -
Aip05g00414 257 SMART rav1_2 118 182 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 242 - -
Aip05g00414 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 242 - -
Aip05g00414 257 MobiDBLite consensus disorder prediction 104 123 - -
Aip05g00414 257 MobiDBLite consensus disorder prediction 66 89 - -
Aip05g00414 257 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 PRINTS Ethylene responsive element binding protein signature 158 178 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 ProSiteProfiles AP2/ERF domain profile. 118 176 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 MobiDBLite consensus disorder prediction 182 210 - -
Aip05g00414 257 Pfam AP2 domain 118 168 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 CDD AP2 117 176 IPR001471 GO:0003700|GO:0006355
Aip05g00414 257 SUPERFAMILY DNA-binding domain 118 177 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00414 Aip-Chr5 4651239 4652197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00414 1 257 AP2-EREBP Transcription Factor Family AT5G47230 47.000 1.26e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip05g00414 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00414 K09286 - gmx:100808173 263.077