Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00402 ATGCTTTCATCTGCATCCTTTCCTTCCACTCTCCCCGCCGCTAACTTCATCGGAGGATCCGTCGCTCCGCCGCCTTCTCGCGTCAGATCCCGCCCGATTGTCTCCTTCGCCACCGCTACAGCCACCGCAGAAGCACGCTCTACCTGGACGGACCAAAAGAGGCCTTCGTTTCTGAACCCCGACGCCATCATCCCTTCCTGCAGTTCTCTCTATGAGGTTCTTGGTATTCCCGCCGGTGCCTCCAGCCAGGAGATCAAGGCGGCGTACCGGCGACTCGCCAGAGTCTGCCACCCGGACGTGGCGGCGATCGATCGGAAAAGCTCCTCGGCGGACGAGTTTATGAGGATTCACGATGCTTACTGTACTTTGTCCGATCCTGAGAAGCGCGCCACTTATGATCGGAGCCTATTCGGGATGCGGCAACGGCCGTTGTCGACGGCATCCGTATTTTCTGGCTACACCAGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 495 0.5919 MLSSASFPSTLPAANFIGGSVAPPPSRVRSRPIVSFATATATAEARSTWTDQKRPSFLNPDAIIPSCSSLYEVLGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKSSSADEFMRIHDAYCTLSDPEKRATYDRSLFGMRQRPLSTASVFSGYTSRNWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00402 164 Pfam DnaJ domain 70 133 IPR001623 -
Aip05g00402 164 PANTHER - 1 164 - -
Aip05g00402 164 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Aip05g00402 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 164 - -
Aip05g00402 164 SUPERFAMILY Chaperone J-domain 35 132 IPR036869 -
Aip05g00402 164 CDD DnaJ 71 125 IPR001623 -
Aip05g00402 164 PRINTS DnaJ domain signature 71 89 IPR001623 -
Aip05g00402 164 PRINTS DnaJ domain signature 89 104 IPR001623 -
Aip05g00402 164 PRINTS DnaJ domain signature 108 128 IPR001623 -
Aip05g00402 164 SMART dnaj_3 68 128 IPR001623 -
Aip05g00402 164 Gene3D DnaJ domain 59 155 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00402 Aip-Chr5 4489298 4490186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00402 71 133 C2H2 Transcription Factor Family AT1G74250 45.455 4.56e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00402 - - aip:107642575 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00402 05 4489298 4490186 Aip05g00402 05 4489298 4490186 ECH