Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00396 ATGTTGTTATTTGCCAGGGTTGTAGTTGGAGAAGGAGGTGGAAAATGGATAGGACTAGTAACCGCCATATGGGTTCAAGCAATATGTGGAAACAACTACACTTTCGCCAACTACTCCGATGTTTTGAAGTCCCTAATGTCTCTAACACAGATGCAACTCAACAATCTCTCTGTTGCTAAGGATGTTGGCAAGGCTTTTGGTCTCCTCTCTGGTCTTGCTTCTCATCACTTCTCTACTTCACTTATTCTCATTATTGGAGCCACCATGGGATTCATAGGTTATGGTCTTCAATACCTTGTTGTCAGCCAAACAATTACTCCACTCCCTTATTGGCTCATGTGTGTATTCTTGTGTATGGGGGGAAACAGCACAACATGGATGAACACAGCAGTTCTTGTTACTTGTATGAGGAACTTCCCGAAGAACAGAGGACCAATTTCTGGGATTCTAAAGGGTTATGTTGGACTCAGCACTGCAATCTTCACTGACATATGTTCTGCTTTGTTCTCCTCAGACCCTTCCAAGTTTCTGCTAATGCTTACCATTGTTCCTGCCGTCATTTGCTGCATTGCTGCTGTTTTCCTTCGCGAAACGCCGCCGGCTTCCACTTGTGCTCAAGAGAAGAAAGAAGCTCAGTTCCTCAACACATTCAACTTCATTGCTGTTACGGTAGCTGTTTATCTTTTAGCCTTTGATGTTACCGGAATTCATGGCCATGTTTTTTCCTTGATTTTCACAGCTGGGCTTCTTATCCTATTGGTCATGCCGCTTCTTGTGCCTTTGTATGTGATCATCTTCAATAGTACTGATCTAGACGAAGAACAACAGATTCATGAAGCGTTGCTTGATGGGGACAAGAAGGTGGAGGAAGTTGAAATTATAAAACAAAAGCCTGTTATAGGGGAGGAACATAGCATAGGTGAAATGGTGAGAACCATTGAATTTTGGATCATGTTTGTGTCTTTCCTTTGTGGAGTAGGAACAGGAATGTGTGTGATGAACAACATGGGGCAGATGGGAGAAGCACTTGGTTACTCCGATGTTTCAATCTTCATTTCCTTCATTAGCATATGGGGTTTCTTCGGACGCATTGTTTCTGGCTCGCTCTCAGAACACTACATCAGAAAATCAGGGATGCCAAGGCTAGTTTGGAATGCAGGTGCACAAATGCTTATGAGTATAGGGTACATTGCATTGGCTATGGCATTGCCCGGGTCACTTTACATAGGTTCAATGGTAGTGGGAATATGCTATGGAGTTTACTTTACAATAACACCAGCAGCAGCTTCAGAGTTATTTGGGCTTAAATACTATGGCATAGTATACAACATTCTAATTCTGAACCTTCCTATTGGCTCATTCATCTTCTCTGGCCTCATTGCTGGCTACCTATATGATGTTGAAGCCACAAGTGTGCCTGGTGGGGGCAACACTTGCATTGGTGCACATTGCTATAGGCTTGTTTATGTCATTATGGCTTTTGCTTCTCTATTTGGCTGTGTCTTGGATGTGCTTCTTGCTGTTAGAACAAATAAGGTTTATTATAACATCTATCAAGACACAAGAAGCCTTGCCAATTCAATCAAATAG 1590 0.4252 MLLFARVVVGEGGGKWIGLVTAIWVQAICGNNYTFANYSDVLKSLMSLTQMQLNNLSVAKDVGKAFGLLSGLASHHFSTSLILIIGATMGFIGYGLQYLVVSQTITPLPYWLMCVFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPISGILKGYVGLSTAIFTDICSALFSSDPSKFLLMLTIVPAVICCIAAVFLRETPPASTCAQEKKEAQFLNTFNFIAVTVAVYLLAFDVTGIHGHVFSLIFTAGLLILLVMPLLVPLYVIIFNSTDLDEEQQIHEALLDGDKKVEEVEIIKQKPVIGEEHSIGEMVRTIEFWIMFVSFLCGVGTGMCVMNNMGQMGEALGYSDVSIFISFISIWGFFGRIVSGSLSEHYIRKSGMPRLVWNAGAQMLMSIGYIALAMALPGSLYIGSMVVGICYGVYFTITPAAASELFGLKYYGIVYNILILNLPIGSFIFSGLIAGYLYDVEATSVPGGGNTCIGAHCYRLVYVIMAFASLFGCVLDVLLAVRTNKVYYNIYQDTRSLANSIK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00396 529 Pfam Nodulin-like 15 261 IPR010658 -
Aip05g00396 529 CDD MFS_Mch1p_like 14 500 - -
Aip05g00396 529 SUPERFAMILY MFS general substrate transporter 30 511 IPR036259 -
Aip05g00396 529 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 523 - -
Aip05g00396 529 Gene3D MFS general substrate transporter like domains 278 512 IPR036259 -
Aip05g00396 529 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 12 523 - -
Aip05g00396 529 Gene3D MFS general substrate transporter like domains 15 209 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00396 Aip-Chr5 4425476 4427838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00396 15 523 Nodulin-like Gene Family AT4G34950 59.191 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00396 - - pop:18099178 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00396 05 4425476 4427838 Aip05g00396 05 4425476 4427838 ECH