Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00395 ATGCATCAATACCATGACTATGAGACTATGACTATTGTTGTCAAGTATCGGGGAGCAAATGTTGTCACCGTTAATGTTGCTGCTGCCAAGGGCCTTATCAACACCGGCTACCTTTATCTCGATGTCAGAACTGTTGAAGAGTTTAGAAAAGGGCATGTAGATGCTGCTAAGGTCGTTAACATTCCATACATGTTGGATACACCCAAGGGTAAGGTGAAGAATCCAGACTTTTTAAAAGAGGTTTCATCTATTTGTAACAAAGAAGATCATCTCATTGTGGGTTGCCAAAGTGGAGTAAGATCTCTGTATGCAACTACCGATCTTGTTGCTGATGGCTACAAGGATGTGAAGGACATGGGAGGGGGTTATATGGAGTGGGTCAAAAACAAGTTTCCAGTGAAATCATCATTAGGGAAAAAGGATCTCTAA 429 0.4149 MHQYHDYETMTIVVKYRGANVVTVNVAAAKGLINTGYLYLDVRTVEEFRKGHVDAAKVVNIPYMLDTPKGKVKNPDFLKEVSSICNKEDHLIVGCQSGVRSLYATTDLVADGYKDVKDMGGGYMEWVKNKFPVKSSLGKKDL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00395 142 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 20 133 IPR036873 -
Aip05g00395 142 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 136 IPR044684 GO:0003824
Aip05g00395 142 CDD RHOD 28 127 - -
Aip05g00395 142 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 136 - -
Aip05g00395 142 ProSiteProfiles Rhodanese domain profile. 33 135 IPR001763 -
Aip05g00395 142 Pfam Rhodanese-like domain 32 128 IPR001763 -
Aip05g00395 142 Gene3D - 7 135 IPR036873 -
Aip05g00395 142 SMART rhod_4 24 132 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00395 Aip-Chr5 4423702 4425390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00395 9 135 Sulfurtransferasese or Rhodanese AT5G66170 55.118 5.90e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00395 - K15692 aip:107642568 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00395 05 4423702 4425390 Aip05g00395 05 4423702 4425390 ECH
Aip05g00395 05 4423702 4425390 Aip01g00037 01 361340 363474 PCT