Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00389 ATGGCGAAAGAGGGAGTAGCAGTTGACTTCGAGTACGCCAAGCAGATAGACAAGGCGCGTCGAGAACTACGCGCTCTTATCTCCTCCAGGAACTGCGCTCCTCTCATGCTCCGATTAGCATGGCACGATGCTGGTACCTATGATGCAAAGACGAGAACAGGAGGTGCCAATGGTTCCATTAGGAATCAACAGGAATTGAATCACCAAGCTAACAGGGGCTTGGAAACAGCTGTTCAATTTTGTGAAGGGCGCCTTCCAGATGCTACAAAAGATGCACAGCATTTAAGGGATGTCTTTTATCGCATGGGTCTCACTGATAAACATAAAGAACGGTCAGGCTTTGAAGGCCAATGGACAGAGAACCATTTGAAGTTTGATAACTCCTATTTTGTAGAGCTAATGGATTCAAAAGATTCATTCAAGCTTCCAACAGACAAGGTTCTAGTTGAGGATCCTGAGTTCCGCAAGTATGTAGTACGCTACAAAAATGATGAGGATGCTTTTTTCGCAGATTATGCAGTGTCACACAAGAAGCTCTCAGAGCTGGGCTTCAATCCAAATCGTGTTTCAGATAGCCGTATAGTCCATGGAGTTATAGGGTTTCTAGTTGCCTCAACCGTGATCGTGATGGGTTACTTAATTGAAATCAACAGAAAAAGCAAGTGA 666 0.4459 MAKEGVAVDFEYAKQIDKARRELRALISSRNCAPLMLRLAWHDAGTYDAKTRTGGANGSIRNQQELNHQANRGLETAVQFCEGRLPDATKDAQHLRDVFYRMGLTDKHKERSGFEGQWTENHLKFDNSYFVELMDSKDSFKLPTDKVLVEDPEFRKYVVRYKNDEDAFFADYAVSHKKLSELGFNPNRVSDSRIVHGVIGFLVASTVIVMGYLIEINRKSK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00389 221 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 82 IPR044831 GO:0004601|GO:0034599
Aip05g00389 221 SUPERFAMILY Heme-dependent peroxidases 13 197 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Aip05g00389 221 Gene3D - 5 88 - -
Aip05g00389 221 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 1 82 - -
Aip05g00389 221 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 82 216 IPR044831 GO:0004601|GO:0034599
Aip05g00389 221 Pfam Peroxidase 20 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 82 216 - -
Aip05g00389 221 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip05g00389 221 Gene3D Peroxidase, domain 2 89 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00389 Aip-Chr5 4383285 4386439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00389 124 183 Peroxidase AT4G17690 40.000 6.12e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00389 K00434 - gmx:100806101 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00389 05 4383285 4386439 Aip05g00389 05 4383285 4386439 ECH