Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00368 ATGAATAATCTCAACAACTTGGTTTCAATTGTGTTCAATTTAATTGGTCTAACAAAGGGACCAAACAATGTCTCTTTATGTTATTTGCTATCATCTGAGTCTGCAGCAGCATCTTCATCAAATGAACTCATCATGGAGAATAATGGTGAGGCTGTTTGGTGCTGTGTATGCTTGTCGAGGTTAAAGGACGAAGACGAAATTCGAGTCCTTCCTTGCCTGCACAAGTTCCACAAGATTTGTGTGAATAGATGGCTCAAAGGTCGCCACAAAACCTGCCCCCTCTGCCGGTTTTCGATGGGAGGTGGCGGCGAGGAGAAGTCGCACCACCGCCCCGAAATGTTCACCGAAGAGATGTTGATATGGTTTTCTTCTTTCCATATAGCTGGTATGTAG 393 0.4427 MNNLNNLVSIVFNLIGLTKGPNNVSLCYLLSSESAAASSSNELIMENNGEAVWCCVCLSRLKDEDEIRVLPCLHKFHKICVNRWLKGRHKTCPLCRFSMGGGGEEKSHHRPEMFTEEMLIWFSSFHIAGM 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00368 130 Pfam Ring finger domain 54 96 IPR001841 -
Aip05g00368 130 SMART ring_2 54 95 IPR001841 -
Aip05g00368 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 101 IPR013083 -
Aip05g00368 130 ProSiteProfiles Zinc finger RING-type profile. 54 96 IPR001841 -
Aip05g00368 130 PANTHER GB|AAF27103.1 36 115 - -
Aip05g00368 130 SUPERFAMILY RING/U-box 48 99 - -
Aip05g00368 130 PANTHER TARGET OF ERK KINASE MPK-1 36 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00368 Aip-Chr5 4095036 4095772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00368 48 100 C3H Transcription Factor Family AT1G80400 49.057 1.22e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00368 - - gmx:100527665 163.696