Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00350 ATGGTGATTGAGAACGACATTGAGAGCTGTGGGAGCAGGGCGGTGCAGTCCTCGTCGTCTCACGCGCATCCACGTCATCACCGCCAGAAGCTAGAGGTCTACAATGAGGTCCTCCGCCGTATTCAGGACTCAAATTCCGACGAAGCTAACGTCCCTGGCTTCGACGATCAACTCTGGCTTCACTTCAATCGTCTTCCCGCTAGGTATGCTTTGGATGTGAACGTGGAGAGGGCAGAGGACGTTCTTGCTCATCAGAGATTACTCAAGCTCGCTGAGGACCCCGCTAATCGACCAGCATTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGTGGTGCCAATAATGTTGATTCCATGCACTCAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACCATTCATTTAAGCAGGGAGTTCATCCCCCGCCTACTTTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAAAATGTTGAAGATGGGGGCAGTCCTATGGGTGTGATGCCATATATTCAGCGGCCCATGCACGAGATCACTTTTTCAACAGTTGACAAACCTAAACTGCTTAGTCAGTTAACCTCAATTCTTGGTGAGCTTGGACTGAACATTCAGGAAGCTCATGCCTTTTCAACCTCTGATGGGTTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTGTTCTGGAAAGGGAAATTTTGAAGGTTAAGGGCATACTTTCTGGTGCCAGTGAACATTACCAGGCAAGGATGGAACCATCCCCACATTGCATAGAAATACCATCTGATGGAGCTGATGTATGGGAAATTGATCCCAACCAGCTCAAATATGAAAACAAAGTGGGCTCTGGATCATTTGGTGACTTGTACAGGGGTACATATTGCAGTCAGGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAGTACAGATATGTTGAGGGAGTTTGCACAGGAAGTTTATATCATGAGGAAAATTCGACACAAAAATGTTGTTCAGTTCATCGGTGCATGTACTCGGCCACCAAATCTTTGTATAGTTACGGAGTTTATGTCTAGAGGAAGCTTATATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTCCCATCTTTACTAAAAGTAGCGATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTGAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCAAGAGTGCAAACTCAATCGGGAGTGATGACTGCCGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACGGGAGAACTACCATACTCTTACTTGACCCCATTGCAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTACGGCCTACAATCCCCAAAAATACACATCCAAGACTTTCTGAATTGCTCCAGCGGTGCTGGCAGCAAGATCCATTGCTGAGACCGGATTTCTCTGAAATTAAAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGAAGATAAAGATCGACACAAAGAAAAGTCATCCCATTCCCACGGCTTTCTCTCAACACTAAGACGTGGCCATCACTGA 1707 0.4499 MVIENDIESCGSRAVQSSSSHAHPRHHRQKLEVYNEVLRRIQDSNSDEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHQRLLKLAEDPANRPAFQVRLVQVYPFGGANNVDSMHSDPSEKEDAQSSLNHSFKQGVHPPPTFGSSSNLEALALQNVEDGGSPMGVMPYIQRPMHEITFSTVDKPKLLSQLTSILGELGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEREILKVKGILSGASEHYQARMEPSPHCIEIPSDGADVWEIDPNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPLLRPDFSEIKEILQQIAKEVNEDKDRHKEKSSHSHGFLSTLRRGHH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00350 568 PRINTS Tyrosine kinase catalytic domain signature 360 373 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 PRINTS Tyrosine kinase catalytic domain signature 443 453 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 Gene3D Phosphorylase Kinase; domain 1 276 364 - -
Aip05g00350 568 MobiDBLite consensus disorder prediction 543 558 - -
Aip05g00350 568 MobiDBLite consensus disorder prediction 543 568 - -
Aip05g00350 568 CDD STKc_MAP3K-like 292 535 - -
Aip05g00350 568 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 553 - -
Aip05g00350 568 CDD ACT_TyrKc 178 245 - -
Aip05g00350 568 Coils Coil 532 552 - -
Aip05g00350 568 Pfam Protein tyrosine and serine/threonine kinase 286 535 IPR001245 GO:0004672|GO:0006468
Aip05g00350 568 ProSiteProfiles ACT domain profile. 180 252 IPR002912 -
Aip05g00350 568 SMART serkin_6 286 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00350 568 SUPERFAMILY ACT-like 178 242 IPR045865 -
Aip05g00350 568 ProSitePatterns Protein kinases ATP-binding region signature. 292 313 IPR017441 GO:0005524
Aip05g00350 568 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 17 553 - -
Aip05g00350 568 SUPERFAMILY Protein kinase-like (PK-like) 263 535 IPR011009 -
Aip05g00350 568 ProSiteProfiles Protein kinase domain profile. 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00350 568 Gene3D Transferase(Phosphotransferase) domain 1 365 563 - -
Aip05g00350 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Aip05g00350 568 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00350 Aip-Chr5 3860265 3868203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00350 8 567 MAP Kinase Kinase Kinase AT4G35780 70.650 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip05g00350 PK_Tyr_Ser-Thr 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00350 - - gmx:100816767 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00811 01 14237373 14238643 Aip05g00350 05 3860265 3868203 PCT