Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00349 ATGAAATCAGTGATAGCAACATCGTTTGATGTCTCCGGCGCATGTTTGTCTTCACGTCCTTCCCTCCTTAATGCTTACCACACAACCAGCAGGCCTTCATCTATAGTGGCCATCAATTATCAAAAGGAATATAGTAGTAGAAGGATTCGTGTTGAACCCAAGTTTCCATTTCGGAGGGAAGCTGGTTTGAGTGGGAGCTTAGAAGCTGTTGGAGTTCCAACCTCGGTGCCGGTGCGTGTGGCACACGAGCTTCTTCTTGCTGGCCATCGCTATTTGGATGTCAGGACTCCAGAAGAGTTCCATGCAGGACATGCTCCTGGCGCAATTAACATACCTTACATGTTCAGAGTCGGATCAGGGATGACAAAAAACACCAACTTCGTTAAAGAGGTCTCCTCAGAGTTGAGAAAAGATGATGAAATTATTGTAGGGTGTCAGCTCGGTAAAAGGTCCATGATGGCTGCTACTGACTTATTAGCCGCTGGGTTCACCGGAGTAACGGATATAGCTGGTGGTTATGCGGCTTGGACCCAAAATAACCTTCCAACAGAACTGTGA 558 0.4695 MKSVIATSFDVSGACLSSRPSLLNAYHTTSRPSSIVAINYQKEYSSRRIRVEPKFPFRREAGLSGSLEAVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFHAGHAPGAINIPYMFRVGSGMTKNTNFVKEVSSELRKDDEIIVGCQLGKRSMMAATDLLAAGFTGVTDIAGGYAAWTQNNLPTEL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00349 185 Gene3D - 65 184 IPR036873 -
Aip05g00349 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 71 183 IPR036873 -
Aip05g00349 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Aip05g00349 185 SMART rhod_4 75 182 IPR001763 -
Aip05g00349 185 CDD RHOD 92 176 - -
Aip05g00349 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
Aip05g00349 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 184 - -
Aip05g00349 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00349 Aip-Chr5 3857572 3859359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00349 75 182 Sulfurtransferasese or Rhodanese AT5G66170 49.091 2.95e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00349 - - gmx:100499831 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00349 05 3857572 3859359 Aip01g00037 01 361340 363474 PCT