Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00328 ATGGATCACAGAACAGAGGAAGAAGAAGGAGAACAACAAAATTTGGGGGAAGAAGCAGTGCATGACGAGAGGAGGAGAAAGCAGAAGATAACAATAAGGTTGGTTTATGCTGATGGATCAAGTAGATGGAATTCGTCTTCTAGTTGTACTGCTTTGTCTTACTGTTGTCAAGCAGATGAATGCCTAGCAGACTTGCAAGCTGCTAAAAGATACAATCGCCGTCACAAGGTTTGCGAGCGACATGCTAAAGCTCCGGTTGTCTTAGTTTCTGGCACTCGGCAAAGATTCTGCCAACAGTGTAGCAAATTTCATGAGCTAGCCCTATTTGATGACAACAAAAGGAGCTGCAGAGAAAGATTGGCCAGTCACAATGAGCGCAGAAGAAAAGCTCAAGCTCATCATGCAGACCTTCAACCCCAACCAGAGAGCGATATCAATTAA 441 0.4422 MDHRTEEEEGEQQNLGEEAVHDERRRKQKITIRLVYADGSSRWNSSSSCTALSYCCQADECLADLQAAKRYNRRHKVCERHAKAPVVLVSGTRQRFCQQCSKFHELALFDDNKRSCRERLASHNERRRKAQAHHADLQPQPESDIN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00328 146 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g00328 146 Gene3D - 52 117 IPR036893 GO:0003677|GO:0005634
Aip05g00328 146 SUPERFAMILY SBT domain 54 134 IPR036893 GO:0003677|GO:0005634
Aip05g00328 146 ProSiteProfiles Zinc finger SBP-type profile. 53 130 IPR004333 GO:0003677
Aip05g00328 146 PANTHER - 5 139 - -
Aip05g00328 146 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 5 139 IPR044817 GO:0003677
Aip05g00328 146 MobiDBLite consensus disorder prediction 122 146 - -
Aip05g00328 146 Pfam SBP domain 56 129 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00328 Aip-Chr5 3688026 3688565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00328 56 146 SBP-box Gene Family AT1G53160 58.242 2.09e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip05g00328 SBP 8.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00328 - - zju:107424290 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00328 05 3688026 3688565 Aip05g00328 05 3688026 3688565 ECH