Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00322 ATGGTGATTTCTGATGAGAACATCTCTAACTCAATCAACCCCACAAATCTCCAAGGAGGTTTAGATTATATGGATACAAAAAAAACTGGGCAGAATAGAAGAGCTTTAAGTGTTATCAATCAGAGTGTGGTGGAAGGTAGACATTACCCTTGCATTGTGAACAAAAGGGCATTTGCAGAAAAACATGCAGTTTGTGAGAAGAAGCAGGTGGATCCAGTGCACCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTACCACACAACAGTTTCGGGATGAGGAAAACAAAAGGAATACAAACCATTCCAATCGCTTTGGAGAGTATATACTCATTGATGATGAACACAAGTCAGTGGAAGATCAGCCGGTGCCGATGTCTCTGGAGCATACAGGGCAACTGGACAATGATTCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAGATGTTGAAGAGCCCATTGTGGACATTGATAGCGGTGATGCAAATAATACTCTTGCAGTTGTGGACTATATTGAAGAACTTTATATCCATTACAGAAAAATGGAGAGGACTAGTTGTGCCTCGCCAAATTATATGACGCAACAATTTGACATTAACGAAAGGATGAGGGCTATACTGATTGACTGGCTAATTGAGGTGCATGATAAGTTTGAGCTCATGCATGAAACATTGTTCCTTACAGTTAACCTCATAGATAGATTCTTGGAAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTTGTTAGTGATTTGATCCTTATATCAGACAAGGCATATACAAGGAATGAAGTTTTGGATATGGAGAAGTTGATGCTGAACACATTGCACTTTAACATGTCTGTTCCAACAGCATATGTTTTCATTACAAGGTTCCTAAAGGCAGCACAAGCAGACAGAAAGCTTGAGCTACTAGCTTTCTTCTTGGTAGAACTATCTCTAGTGGAGTATGAGATGCTTAAGTTCTCGCCGTCTTTGCTAGCTGCAGCTGCAGTCTATACAGCTCAATGCACCGTCTTCGGCTTCAGACAGTGGAGCAAGACATGTGAATGGCATACCAATTACACAGAAGAGCAACTATTAGAGTGCTCGAGTTTAATGGTTGGTTTCCACCAGAAGGCAGGGTCAGGGAAACTTACAGGGGTGCATCGGAAGTACTGTTCTTCAAAGCACAACTACACTGCAAAATGTGAAGCAGCAAGTTTTCTTCTTGATAACTCATTGTTGTAG 1290 0.4171 MVISDENISNSINPTNLQGGLDYMDTKKTGQNRRALSVINQSVVEGRHYPCIVNKRAFAEKHAVCEKKQVDPVHRPITRRFAAQIATTQQFRDEENKRNTNHSNRFGEYILIDDEHKSVEDQPVPMSLEHTGQLDNDSDQMEEVEMEDIDVEEPIVDIDSGDANNTLAVVDYIEELYIHYRKMERTSCASPNYMTQQFDINERMRAILIDWLIEVHDKFELMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLILISDKAYTRNEVLDMEKLMLNTLHFNMSVPTAYVFITRFLKAAQADRKLELLAFFLVELSLVEYEMLKFSPSLLAAAAVYTAQCTVFGFRQWSKTCEWHTNYTEEQLLECSSLMVGFHQKAGSGKLTGVHRKYCSSKHNYTAKCEAASFLLDNSLL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00322 429 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g00322 429 Pfam Cyclin, N-terminal domain 177 301 IPR006671 -
Aip05g00322 429 SMART Cyclin_C_2 303 420 IPR004367 -
Aip05g00322 429 CDD CYCLIN 301 388 IPR013763 -
Aip05g00322 429 Gene3D - 189 301 - -
Aip05g00322 429 PANTHER CYCLINS 22 423 IPR039361 -
Aip05g00322 429 SUPERFAMILY Cyclin-like 164 300 IPR036915 -
Aip05g00322 429 SMART cyclin_7 210 294 IPR013763 -
Aip05g00322 429 SMART cyclin_7 307 389 IPR013763 -
Aip05g00322 429 CDD CYCLIN 204 293 IPR013763 -
Aip05g00322 429 SUPERFAMILY Cyclin-like 302 419 IPR036915 -
Aip05g00322 429 Gene3D - 176 415 - -
Aip05g00322 429 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Aip05g00322 429 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g00322 429 PIRSF Cyclin_A_B_D_E 7 428 IPR039361 -
Aip05g00322 429 Pfam Cyclin, C-terminal domain 303 417 IPR004367 -
Aip05g00322 429 PANTHER CYCLIN-B2-1 22 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00322 Aip-Chr5 3634603 3638016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00322 1 424 Core Cell Cycle Gene Families AT1G20610 58.565 2.64e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00322 K21777 - gmx:100779889 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00322 05 3634603 3638016 Aip05g00322 05 3634603 3638016 ECH