Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00320 ATGGGAGGTGAAGGTGCTGTGGAGGACTCCAAGGCCAACACCACCGAGGGAGGAGGCGGTGGAGGAGGAGTCAACATCAACATTCGGTGCTCGAACGGTTCAAAGTTCTCCGTTTCAATTGGTCTAGATTCCACCGTCGTCTCCTTCAAGGAGGTTGTGGCTCGCAGTTGTGACATACCTGCTAACCAACAGCGCCTGATTTACAAAGGTCGCATCCTCAAGGATGATCAAACTCTCCAGAGCTACGGNNATTTTAATTGGCACTGTTTGGAGGCAGACCACACTGTCCATTTGGTTCGTGGCTTTGCGCCTTCAGGTGCTGGTGGTGGGACCAATACTACTGGTGCTAACAGCACAGCTAATACGAGAGGTGCCGGAGCTACTGAGGGTGGGGGCTTAGGTGCTTCACCATTCCCTGGGTTAGGACTCAATGGGATGGGGGGCAATGGCCTTGGTGGTTTATTTGGAGCGGGCTTTCCTGATCTTGAACAGATGCAGCAACCATTCTTGTCGAATCCCAATATTGTGAGGGAAATAATGAACACACCTGCCATGCAGAATTTAATAAATAATCCCGAGATAGTGCGGAATCTTATAATGAATAACCCACAGATGCAAGAGCTCATGGATCGAAACCCTGAGCTAGCACACATCCTTAATGATCCCAGCACACTTCGCCAAACACTTGAAGCTACAAGGAATCCTGAGATCATGCGCGAAATGATGAGGAATACGGACAGAGCAATGAGCAACATTGAATCCTCTCCTGAGGGATTCAACATGCTGAGGCGTATGTACGAAAATGTTCAAGAGCCCTTTCTAAATGCCACTACAATGACTGGTAATACAGGAAATGAACAAGTTAGAAACCAAGCGACAAATCCCTCAACTACTAGTTCTGATGCAACTTCCCCCGTGCCCAATACTAACCCACTTCCCAATCCTTGGTCAGCTGCTGGGACTGGAGGTGCCCAAAATACCACTAGAAGATCAACTACTGGTGCGGATGCTCGGCAGCAGACACCACCCACTGGCTTAGGAGGGGCTGGTCTGCCCGATCTTGATGGTATGTTGGGTGGCATGCCAGATGCTGCTTTACTCACACAGTTAATGCAAAATCCAGCTATTTCACAGATGATGCAAAGTATCCTCTCCAATCCACAGACTATGAATCAGATTCTTGGAGTCAATGCTGAGCAGCGTGGCATGCCTGATTTAAATTCTCTCAGAGAAGTGATGCAAAACCCAGAATTTCTTCGTCTATTTTCCTCACCAGAGACCCTGCAGCAACTTATGTCTTTCCAGCAAGCTCTCTTGTCCCAGCTTGGTCAGCAACAATCAACACATAATTGCCATCGGTTGTTCTTGTTGGTAGGATCGATGAACAACTTGAGTTTGGAAATGCTATCGAGCATGTTTGGCGGACTTGGAGCTGGCAGCCTAGCTGTTCCAAACAGATCAAATGAACCACCTGAGCAGCTTAGCAGGTGGGAACGGACACGAGACTAG 1509 0.4844 MGGEGAVEDSKANTTEGGGGGGGVNINIRCSNGSKFSVSIGLDSTVVSFKEVVARSCDIPANQQRLIYKGRILKDDQTLQSYXXFNWHCLEADHTVHLVRGFAPSGAGGGTNTTGANSTANTRGAGATEGGGLGASPFPGLGLNGMGGNGLGGLFGAGFPDLEQMQQPFLSNPNIVREIMNTPAMQNLINNPEIVRNLIMNNPQMQELMDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMTGNTGNEQVRNQATNPSTTSSDATSPVPNTNPLPNPWSAAGTGGAQNTTRRSTTGADARQQTPPTGLGGAGLPDLDGMLGGMPDAALLTQLMQNPAISQMMQSILSNPQTMNQILGVNAEQRGMPDLNSLREVMQNPEFLRLFSSPETLQQLMSFQQALLSQLGQQQSTHNCHRLFLLVGSMNNLSLEMLSSMFGGLGAGSLAVPNRSNEPPEQLSRWERTRD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00320 502 MobiDBLite consensus disorder prediction 483 502 - -
Aip05g00320 502 SMART CBM 202 241 IPR006636 -
Aip05g00320 502 SMART CBM 148 189 IPR006636 -
Aip05g00320 502 SMART CBM 351 393 IPR006636 -
Aip05g00320 502 SMART CBM 396 431 IPR006636 -
Aip05g00320 502 Gene3D - 197 255 - -
Aip05g00320 502 MobiDBLite consensus disorder prediction 274 340 - -
Aip05g00320 502 MobiDBLite consensus disorder prediction 107 125 - -
Aip05g00320 502 PANTHER UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2A-RELATED 1 494 - -
Aip05g00320 502 Pfam Ubiquitin family 26 83 IPR000626 GO:0005515
Aip05g00320 502 SUPERFAMILY Ubiquitin-like 16 118 IPR029071 -
Aip05g00320 502 PANTHER UBIQUILIN 1 494 - -
Aip05g00320 502 CDD Ubl_Dsk2p_like 24 102 - -
Aip05g00320 502 SMART ubq_7 24 101 IPR000626 GO:0005515
Aip05g00320 502 ProSiteProfiles Ubiquitin domain profile. 24 82 IPR000626 GO:0005515
Aip05g00320 502 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g00320 502 MobiDBLite consensus disorder prediction 274 356 - -
Aip05g00320 502 MobiDBLite consensus disorder prediction 105 136 - -
Aip05g00320 502 Gene3D - 22 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00320 Aip-Chr5 3608152 3612022 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00320 K04523 - gmx:100797539 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00320 05 3608152 3612022 Aip05g00320 05 3608152 3612022 ECH
Aip05g00320 05 3608152 3612022 Aip10g00086 10 797432 801867 PCT