Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00313 ATGGGTAATTGTTTTGGTTCACCACCTACGAATGAATCACACTCTACCATCAATAAACCTCGTCATTATTCAGGTTCGTGGAGTGGTGGTGATGAGAGCAAGAAGGTGGCATCATCAACAATTGATGATGGAGGAACAAGCAGTCAAGGAATTAGTAGTCATCAGTTTTCGGCATCGGCATCGGAGATTTCGAGTTTCGGTGGAAGCTTCGGTGGATCGATCATAACTCACAGTGGCCAGATTCTTGAGACTCCGAATCTGAAAGTGTTCAGTTTCATGGAATTGAGAGTGGCAACGAAGAACTTCAAGCCGGATACATTGCTGGGCGAAGGAGGATTCGGAAAGGTTTACAAAGGTTGGTTGGATCAGAGAACGCTTTCTCCGGCCAAAGCAGGTTCCGGCATGGTCGTCGCCGTCAAGAGACTCAACACCGAGAGCGTTCAGGGATTTCAAGAGTGGAAGTCAGAAGTCAGCTTCTTAGGAAGGATTTCTCACCCAAATCTTGTTAAGCTTTTGGGTTATTGTAGAGAAGCTGATGAACTTCTCCTTGTTTACGAGTTCATGCCTAAGGGAAGCTTGGAGAGCCATCTCTTCAGAAGAAACTCTAATACAACAGAACCAATTTCTTGGAACACTCGTCTCAAAATAGCCATTGATGCTGCTAGAGGCTTGGCCTTCTTGCACACTTCAGAAAAGCAAGTTATATATAGAGATTTTAAGGCCTCCAATATATTATTAGATGGGGATTACAATGCAAAGATTTCGGATTTTGGATTAGCTAAATTGGGGCCTGCTGGAGGAGAATCACATGTGAGTACCAGAATCATGGGCACCTATGGTTATGCTGCTCCAGAATACATAGCAACTGGTAATTATCTATTTCACCCCCATTAA 894 0.4396 MGNCFGSPPTNESHSTINKPRHYSGSWSGGDESKKVASSTIDDGGTSSQGISSHQFSASASEISSFGGSFGGSIITHSGQILETPNLKVFSFMELRVATKNFKPDTLLGEGGFGKVYKGWLDQRTLSPAKAGSGMVVAVKRLNTESVQGFQEWKSEVSFLGRISHPNLVKLLGYCREADELLLVYEFMPKGSLESHLFRRNSNTTEPISWNTRLKIAIDAARGLAFLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKLGPAGGESHVSTRIMGTYGYAAPEYIATGNYLFHPH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00313 297 ProSitePatterns Protein kinases ATP-binding region signature. 108 140 IPR017441 GO:0005524
Aip05g00313 297 Gene3D Transferase(Phosphotransferase) domain 1 188 294 - -
Aip05g00313 297 SUPERFAMILY Protein kinase-like (PK-like) 78 292 IPR011009 -
Aip05g00313 297 ProSiteProfiles Protein kinase domain profile. 102 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00313 297 MobiDBLite consensus disorder prediction 31 54 - -
Aip05g00313 297 Pfam Protein tyrosine and serine/threonine kinase 106 292 IPR001245 GO:0004672|GO:0006468
Aip05g00313 297 PANTHER OS01G0588500 PROTEIN-RELATED 54 291 - -
Aip05g00313 297 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 54 291 - -
Aip05g00313 297 Gene3D Phosphorylase Kinase; domain 1 74 187 - -
Aip05g00313 297 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g00313 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Aip05g00313 297 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00313 Aip-Chr5 3540369 3545990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00313 88 290 Glycoside Hydrolase AT3G07070 53.922 1.20e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g00313 PK_Tyr_Ser-Thr 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00313 - - mtr:MTR_8g073560 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00313 05 3540369 3545990 Aip05g00313 05 3540369 3545990 ECH