Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00312 ATGGATTCCTCACTCAGCATCCTCTTAGTCTTCAACAACACCATCCAACCAGAGTTGTTCAGGAGCGTGCATGTGTATTGCAGAGAATTATTGGATGGGGACGAAAGGGAGGAAGAAGAAGTGGTAGTTGAGAGGGAGTTTGTGTTATCTGAGAGTGGCTTCTACGTGGAAATGAAGTGCACTCCAATTCTCACATCACTCAAGCTTTGTGTTGATGATGTTTGTGAAGGTTACAAGAATGGTGTGTGGCTTTGTGTCTTTGCGTTTCATGCTGATCACACGCCTCAATTCACACACATTCCTTCAATTTTGTTGTTCGCCAGAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAGCAGAAGTCAAAGATGATCTGCCAGATTCTTCAAAGGAAGAATCACAGGGAAATAGCGATGGTCACCAATCACCACAGAAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCTTCCTTTGGATGAAGACACAACTGAGTTGATCGACAAGAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGGAGGGCGCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAAGTACTTTGATGTGCCAATTGTAGAAGCGTCAAGAAATCTGAATATTGGGCTTACAGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCACATAGGAAGATAAAATCACTTGACAATCTCATTCATGATCTTGAGGAAGAGGCGAAACACCAAGAACCAAAGGACAAGGTGGCAGCGATGGCGATGGTGAGGAGGCAAAGGATGTTGGAATGCGAAAAGGAAAACATGGAGAAGAAGCCCTTCATGGACATACAAACTGAGACCAAGAGATTCAGGCAAGATGTGTTCAAGAGAAGGCACAGAGCTAGAGCTGTTGAAAAACAAAGTTCTGCAGTTTAA 990 0.4273 MDSSLSILLVFNNTIQPELFRSVHVYCRELLDGDEREEEEVVVEREFVLSESGFYVEMKCTPILTSLKLCVDDVCEGYKNGVWLCVFAFHADHTPQFTHIPSILLFARNSKLKAIPNLLNDLQIIYKLELKAEVKDDLPDSSKEESQGNSDGHQSPQKVLPVFNQDLNCLPLDEDTTELIDKKTNVESLPGFGAKKRRAQSDHIAKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLEEEAKHQEPKDKVAAMAMVRRQRMLECEKENMEKKPFMDIQTETKRFRQDVFKRRHRARAVEKQSSAV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00312 329 PANTHER PROTEIN RKD4 8 326 IPR044607 GO:0003700
Aip05g00312 329 MobiDBLite consensus disorder prediction 137 157 - -
Aip05g00312 329 Pfam RWP-RK domain 207 254 IPR003035 -
Aip05g00312 329 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Aip05g00312 329 PANTHER PROTEIN RKD5 8 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00312 Aip-Chr5 3530477 3534440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00312 15 329 AtRKD Transcription Factor Family AT4G35590 44.713 5.25e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aip05g00312 RWP-RK 5.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00312 - - gmx:113001653 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00312 05 3530477 3534440 Aip05g00312 05 3530477 3534440 ECH