Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00306 ATGGGAGGTTTATTACACTTGTTTGAGTTCAATCAGGGGAGGATGGCCAAGAAAGTTCATGCTCATAAAAGACATCAGGGTGGCCTGGAAGCTCCCCGGAATAGCCTGGATCTGCAATTAGAAACGTCTCAGTACCACTGTCCGGAAGGAGAATTACCAATAGCATATGACTATCAAGTAGAAGAAGACTGGTCAGAGAACATTCCCTGTGCAAATATGGGTTCGATGAAAAAACTTATCAATGAGGAGCTATCCAAACGCTCAACCACCAGGCAAAATGCACCAAGCCTCGTGGCAAGGTTGATGGGGATTGATACGATGCCACCAGACACAAAATCTGTTGTTCCATTAGAAAGAACTAGTGAAATTATGGGGACAAAGGTTTCAAAGAGGGAAATGAATGGAAGGGATTCGGTTAGTCGGGGCTATTATAATTTCAATTCTTCTAGTGAAATGGAATTAGATTCATTTTATGGAGGCATAGATGATGATGATGGGTGGAGCCAAAGTTTTGGAAAACCAAGGCCACGGGAGCATCCTCAAGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTGAAGCGTATCAAGCAGCACGATTTCTGGAGTGCTCAAAAGTTGCCGAAATTGATAGTATTCCTAGACGATTGCTTCCTCAAGAGAACCTAACACATGATACAAGTTCACACAGAACAACCATGGAGAAACTTGCAGAACTTGATAGCCACTTGCTCAAATCAGAGCTACCCGACATTGGTGGTCCCGAATATGGTGATGATGTGATGGAGTTAATCCCAGCTATGCAAAAGAAATCCTTTCCTTCGAGGAGCAGAACACTAAGTAGAGATTTTGAGGAGTCCTTGATAATGAAATCTTATCACAAATTTGATAGATCTTCTTCTCCGACTCGGATAGTTGTCTTGAAGCCTGGCCTTGATAGCATTTGCAACCATGAAGACAATTGGACTGGTTCATCTGGCACTTTACAAGGGAGAAACAGTATAGCAGATTTTCTTGAGGAGGTCAAAGAGCGATTGAAAAGTGAACTACAAGGGAGAACTGTCAAGAAGGGTTCTGTGGTTCGAGGGAGTGGAATTGAGACACGTTACAATGAAAAGCCAGCTGATCCTAAACTAATAGCCCAGCACATAGCAAAACAGGTCAGAGAAAGTGCAACTAGAGACGTCGAAGCAAATTTATTCCGGTCAGAATCAACAAGGTCATATAAAAATGATACGCTGTTCAACGGACCAAGCTCCCCAGAATTTATCTACAGAGACACAAGGAGGTTCTCGTCCGAGAGGCTAAGAAATATTGGGAAAAGCGAAATGCGCATTGACCTTCCTGAGGTGACTTCTAGGAACTCGGCGCCACATGCTTTAGTCAATCACAGAGTTAGGCAAAAGCAAACAGAAGATAAGTGTTCAAATGGCACAAGCCATTGGAAAGTTTCAAAAGGGGAAAATGAAATACAAACAGGATCTTTCAGACATGATCCAGATGACAATGTGTTGTTCCAAAGGGACTTGTCCCCAAGAAACCTTGTAAGGTCCTTGTCTGCTCCTGTATCAGGATCAGGAACATCGTTTGGGAAGCTACTTCTAGAGGACCGCCACGTTTTAACTGGTGCACAAATTCGAAGGAAGCTTGAAGCTGTTGAAACTATTTCTGTTGATGTTAAAAAACAGAAAAAGGATAGATTCAATATTAAAGAGAAAGTCTCCCATTTTAGATATAGCCTTGGTCTAAGAGGGAGGCTTTTCGGAAAAAGGATTCAATCAATGGTAGAATCACATGGCAATGAATATGGTTCCATGGTGAGAGATGTCACCAGTGGACCGACAGTTCTATTGACCTACGGCGAGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCAGTGTGCAGCAGTGTTCATGAAGAATTTTGGAAGCGAGCTGAATACTTAAGTCCACTATCAACTCCAGACGTTTCTTCGAGGGACGACAACATTGTTCCCCAGGTTTTCAGAGATATCAGCTCTGGTTTGAGTGAGCTAAGGAGACAGCTCAATCAACTCGAGTCCAATGGTTCCGAAGACATGACAACAAAACAGGAGCCTCTTGAATCCGAGATAGTTCAACTAGAAGATCCAGCAGAATCTTTCATAAGAGATCTGCTAGTTGCCTCTGGTCTGTACTTTGGATCATGGGATAAATCTTTACTAAGAGGAGACTCATTGGCAAAGCCTATCGGTAACTCGGTATTCAAAGAAGTGGAAGCATCTGGCGAGAGATCAATCAACGGGAATGACGAAGATTCTATAAAGGATCGGAATGAGAATATGATAAACAAGAGGGTCTTGCTTGATTTGTTGAACGAGGCACTTTCGGTTGTTCTTGGACCATCCTTGACATTATCAAGATTCAGAAGGAAAGTAAGCAACACTTCCATGATGATGGCACCACCTTGTGGAAAAGAATTGTTGAAATCAGTGTGGGAAATCATCAGTGCTTCTTTGTATCCGCAATGTGATGAAATATATCCTTATTCTCTTGATGATTTGGTGGCTCAACATTTGGGGTCAGTCCCTTGGTCTGGATTAGTATCTGAAGAGATCAATGTATTGGAAAGAGATGTAGAATGTATGATAACCAATGATCTGGTTGAAGAACTCACAAAAGACATGCTCCTTTTTCGGCCTCAATCGAACCAGCAGCAGCCGAGTCTTATTACCAGGAATTCGACTAACTCGAGCTGA 2745 0.4259 MGGLLHLFEFNQGRMAKKVHAHKRHQGGLEAPRNSLDLQLETSQYHCPEGELPIAYDYQVEEDWSENIPCANMGSMKKLINEELSKRSTTRQNAPSLVARLMGIDTMPPDTKSVVPLERTSEIMGTKVSKREMNGRDSVSRGYYNFNSSSEMELDSFYGGIDDDDGWSQSFGKPRPREHPQEEELQKFKKEFEAYQAARFLECSKVAEIDSIPRRLLPQENLTHDTSSHRTTMEKLAELDSHLLKSELPDIGGPEYGDDVMELIPAMQKKSFPSRSRTLSRDFEESLIMKSYHKFDRSSSPTRIVVLKPGLDSICNHEDNWTGSSGTLQGRNSIADFLEEVKERLKSELQGRTVKKGSVVRGSGIETRYNEKPADPKLIAQHIAKQVRESATRDVEANLFRSESTRSYKNDTLFNGPSSPEFIYRDTRRFSSERLRNIGKSEMRIDLPEVTSRNSAPHALVNHRVRQKQTEDKCSNGTSHWKVSKGENEIQTGSFRHDPDDNVLFQRDLSPRNLVRSLSAPVSGSGTSFGKLLLEDRHVLTGAQIRRKLEAVETISVDVKKQKKDRFNIKEKVSHFRYSLGLRGRLFGKRIQSMVESHGNEYGSMVRDVTSGPTVLLTYGERHENSTEVPPSPASVCSSVHEEFWKRAEYLSPLSTPDVSSRDDNIVPQVFRDISSGLSELRRQLNQLESNGSEDMTTKQEPLESEIVQLEDPAESFIRDLLVASGLYFGSWDKSLLRGDSLAKPIGNSVFKEVEASGERSINGNDEDSIKDRNENMINKRVLLDLLNEALSVVLGPSLTLSRFRRKVSNTSMMMAPPCGKELLKSVWEIISASLYPQCDEIYPYSLDDLVAQHLGSVPWSGLVSEEINVLERDVECMITNDLVEELTKDMLLFRPQSNQQQPSLITRNSTNSS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00306 914 Pfam DUF761-associated sequence motif 94 110 IPR032795 -
Aip05g00306 914 Pfam Domain of unknown function (DUF4378) 716 886 IPR025486 -
Aip05g00306 914 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 892 - -
Aip05g00306 914 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 892 - -
Aip05g00306 914 Coils Coil 671 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00306 Aip-Chr5 3441476 3446056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00306 76 891 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 42.024 4.61e-159 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00306 - - adu:107487403 1767.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00306 05 3441476 3446056 Aip05g00306 05 3441476 3446056 ECH
Aip05g00306 05 3441476 3446056 Aip10g00078 10 705259 709041 PCT