Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00303 ATGCCCTCTGCTTCAGAGGTATATGCTGCAAGAGAGAAGAACAGAATCTATATACCACGTGATCGTTATCTTAGTGAAGAAGCAGAGAAGAAGGCCATGGCTGAAAAGATAGAACGCATGGAACTAGAGGCAGACTCTAAAGATAAGGAATTAAGCAGTCAACAAGAATACTTGAAGCTGAAGGCACGTTATGAAGCCCTACAAAGGTCCCAGAGAAACCTGATGGGAGAAGATCTTGGCCCTCTAAGCAGCAAAGAGCTGGAGTCACTAGAAAGGCAGCTAGATTCGTCGTTGAAGCTAATCAGATCCACAAGGACCCAATTCATGCTGGATCAGCTATCGGAACTTCAATGTAAGGTAGTATGTGATCCATTTTGCTTGCATGGTGTGTTTAATTGGCTGTTCGGTGTACAAGACTAG 420 0.4405 MPSASEVYAAREKNRIYIPRDRYLSEEAEKKAMAEKIERMELEADSKDKELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKLIRSTRTQFMLDQLSELQCKVVCDPFCLHGVFNWLFGVQD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00303 139 Coils Coil 87 107 - -
Aip05g00303 139 ProSiteProfiles K-box domain profile. 50 139 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip05g00303 139 PANTHER SERUM RESPONSE FACTOR HOMOLOG 45 119 - -
Aip05g00303 139 PANTHER DEVELOPMENTAL PROTEIN SEPALLATA 1 45 119 - -
Aip05g00303 139 Pfam K-box region 46 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip05g00303 139 Coils Coil 23 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00303 Aip-Chr5 3331017 3333400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00303 50 121 MADS-box Gene Family AT1G24260 81.944 1.19e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00303 - - aip:107618448 172.17