Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00292 ATGGGATTTTCATGGACCCGAAGATCTGACCCGGAAAAGAGAACAACATTCAGAAGAATACCTCAAAGGCTAGGGCACGCACGGCACAACCCCCTCTNGACCACCCGCCACTGTCACCACTCACCGGCGCTTCTCTGCTCTATTTTCCCGGCGCTGCTGCCCCCATTCGTCTGCTTCTTCTCTGCCACCATTAGCCCCGCCACCACTAGAAGCCCCGGCGAAGCTCAGTCAGCAACCACCTCTGCTCAACTTCTCCTTTCCCTGTTCTCAAGCTCAGGAAGAAAGTTTAATGACTCCAATGACAGCAATGAACTTGAATCTTTTCATCAGGCTGCTACCAGGCTTGGAATTACATATTCTAGAGCAGCTCTTGCTGAAAGAAGAGCTCTCAAGAAGGTCATAGAAAGGGCTCGGGTAGAGGAAGACAAGCAGAAAGAATCAATTGTTGCTTATCTTTTGCATCTTATGAGGAAATACTCAAAATTATTTAGAAATGAGATCTCAAATGACAATGATTCTCAGGATTCTGCATCTTATTCTCCCACTGTTTAG 552 0.471 MGFSWTRRSDPEKRTTFRRIPQRLGHARHNPLXTTRHCHHSPALLCSIFPALLPPFVCFFSATISPATTRSPGEAQSATTSAQLLLSLFSSSGRKFNDSNDSNELESFHQAATRLGITYSRAALAERRALKKVIERARVEEDKQKESIVAYLLHLMRKYSKLFRNEISNDNDSQDSASYSPTV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00292 183 PANTHER U BOX DOMAIN-CONTAINING 91 180 - -
Aip05g00292 183 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 91 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00292 Aip-Chr5 3158602 3160227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00292 93 183 U-box Gene Family AT1G27910 75.269 5.96e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00292 - - vvi:100256374 148.673