LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g00291	ATGGCACCAGGGCCTGGTTGCACATCTCAGACGACTATGTTGAGTGGTGGTGGCGGCGGCGGGTGTGTCGATAACAGTACTAGTAATGAGTCTGCCATGGAGGATCAAAATGGTGACACAGTTGGGAATTTGATTCACAACATTGGGAAGCCTCCAAGGGACCATTCTGTTATGAGACACTGCACCAGCTCTTCATGGTTGATTGAACCGGAATCAGATATTATGATTGTAGGATTGAAAACAACTAGTGAGGAAAAATCAGAATTTTCACCAAAATTACGGTCTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCTGTGTTGATATTCTCCGAGAACATACTGGTCCATCAGTGAACCTTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGCATTGATGCAGCATCATTTACAAGAAAGAACATCCTTAAGTTTATAATTGAAGATTCTCATTTCCCATCTGGAATCAAGAAAGCTTTCTTCCGGCACCACTGCGCTAATCGCCATTGTCCTGGGAAGGGACATGCTAATTGGGAATGCAGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAACTCTCCAAAGACCATAAACCAAATTGCACATCAGAAAGACTAAGAATTGAGAAACTTGGTGGTGTGATCTACGACGGATACCTGAACGGCCAACTGTCAGTGGCTCGAGCCCTCGGAGACTGGCACATCAAAGGGTCTAAAGGGTCCAAGAGTCCCCTGAGCTCAGAGCCAGAGCTAGAGGAGATTGTGTTGACAGAAGAAGATGAGTTCTTGATAATGGGGTGTGATGGACTTTGGGATGTGATGAGTAGCCAGTGTGCTGTGACAATGGTTAGGAGGGAGCTGATGCAGCACAATGATCCAACAGAATGTGCGAAAGCGCTTGTCGCGGAGGCAATCCAACGCAACACTTGTGACAATCTAACAGTTGTGGTGGTTTGTTTCTCTTTGGATCCTCCTCCAAAGATTGAGATTCCTAGAGCTCATAGGAGAAGGAGCATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATAG	1236	0.3997	MAPGPGCTSQTTMLSGGGGGGCVDNSTSNESAMEDQNGDTVGNLIHNIGKPPRDHSVMRHCTSSSWLIEPESDIMIVGLKTTSEEKSEFSPKLRSGSCSEKGPKQYMEDEFICVDILREHTGPSVNLPSPAAFYGVFDGHGGIDAASFTRKNILKFIIEDSHFPSGIKKAFFRHHCANRHCPGKGHANWECRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTECAKALVAEAIQRNTCDNLTVVVVCFSLDPPPKIEIPRAHRRRSISAEGLDLLKGVLNGR	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g00291	411	ProSitePatterns	PPM-type phosphatase domain signature.	133	141	IPR000222	GO:0043169
	Aip05g00291	411	PANTHER	PROTEIN PHOSPHATASE 2C	248	399	IPR015655	GO:0004722\|GO:0006470
	Aip05g00291	411	PANTHER	PROTEIN PHOSPHATASE 2C	28	171	IPR015655	GO:0004722\|GO:0006470
	Aip05g00291	411	Coils	Coil	249	253	-	-
	Aip05g00291	411	MobiDBLite	consensus disorder prediction	1	43	-	-
	Aip05g00291	411	PANTHER	PROTEIN PHOSPHATASE 2C 47-RELATED	248	399	-	-
	Aip05g00291	411	Gene3D	-	244	390	IPR036457	-
	Aip05g00291	411	Pfam	Protein phosphatase 2C	248	369	IPR001932	-
	Aip05g00291	411	Pfam	Protein phosphatase 2C	95	171	IPR001932	-
	Aip05g00291	411	Gene3D	-	76	179	IPR036457	-
	Aip05g00291	411	MobiDBLite	consensus disorder prediction	1	56	-	-
	Aip05g00291	411	SMART	PP2C_4	84	375	IPR001932	-
	Aip05g00291	411	CDD	PP2Cc	94	377	IPR001932	-
	Aip05g00291	411	ProSiteProfiles	PPM-type phosphatase domain profile.	94	377	IPR001932	-
	Aip05g00291	411	SUPERFAMILY	PP2C-like	249	377	IPR036457	-
	Aip05g00291	411	PANTHER	PROTEIN PHOSPHATASE 2C 47-RELATED	28	171	-	-
	Aip05g00291	411	SUPERFAMILY	PP2C-like	86	172	IPR036457	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g00291	Aip-Chr5	3155626	3158330	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip05g00291	249	409	PP2C-type Phosphatase Gene Family	AT3G51470	88.199	3.57e-101	301

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g00291	K14803		-	pop:7480467	419.853