Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00280 ATGACCATTGATATGCCACCATCTGTGGCACAAAGCGTGAGGACTAATAGATCTTCATTTAGTTCAAGCTTTGGCCATGAGGATAATACCCCTCTTCACCACTATTCTGCTGTTAGTAATGGTGATGGCTATGAAAGTGATAGCTCAAGTTTTGCACCACCCACACCAAACACTCTATCAACAGCTATTCCAGCTGAACTTGCTGGAGTTGTACCCTTGATTGATAGATTCCAGGTAGAAGGATTTTTAAAATTGATGCATAAACAAATTCAATCTGCCGGCAAACGAGGATTTTTTTCTAAAAGATCTGTGGGACCTCAAGTTCGAGATAAACTTACATTCGAGGACATGCTTTGTTTCCAGAAGGATCCAATTCCAACATCATTGCTTAAGCTGAACAGTGATTTGGCAAGTCGTTCAACAAAATTATTCCAGCTAGTTTTGAAATATATGGGAGTTGATTCATCTGATCGTGTATCTCCAATTAGCTTAGACGAACGAGTTGAGCTTGTAGGCAAAATATACAAGCAAAGTTTGAAACATTCAGAACTCCGGGATGAACTTTTTGTCCAAATATCAAAACAAACAAGGAACAACCCAGATAGGCATGCACATTTCTTAACATGGGAGTTAATGTATTTATGTGTATCTTGCATGCCTCCTGGTAAAGACATTGGGGGATATCTATCAGAATATATTCATCATATAGTAAATGGTGTGAATACCGGCCCCGAGATACGAGCTCTTGCATTGAATACATTGAGTGCATTGAAGCGCTCTGTCAAGGCTGGTCCTAGACATATAATTCCAGGGCCCAAGGAGATTGAAGCTCAGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACTTTTGAAGAAATTACGTATGACATGTCAACAACGGTTGCTGATGCTGTTGAGGAACTTGCAGGGATCATCAAGTTGTCAACATACTCTAGCTTTAGCCTCTTTGAATGTCGCAAAGCTGTTACTGCCTCAAAATCACCTGATTCCGAGGAGTACGTCGGGCTAGATGATAATAAACATATTGGGGATCTACTAGCAGAATTTAAGGCAGCAAAAGATCGAAGCAAAGGAGAAATTTTGCATTGTAAATTGATCTTCAAGAAGAAATTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTATGCAGTTGTCCTATGTACAATTGCAACATGATTATATTTTTGGAAATTATCCGGTTGGAAGGGATGAAGCTTCCCAGCTATCTGCATTGCAAATTTTAGCTGAGATTGGATTTGTTAGGAGACCCGAATCATGCTCTGACTGGAGCTCATTTCTTGAGCGATTTCTGCCTAGACAAATTGCAATGACACGAGCAAGACGGGAATGGGAGCTGGACATTCTTTCATGCTACCATTCACTGGAGCATTTGACAAAAGATGATGCAAGACAGCAATTCCTGCATATACTCAGGACACTTCCATATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCAATCGGGCTTTTACCTGGACGAATAATATTAGGAATTAACAAAAGAGGGGTCCACTTTTTCCGTCCAGTTCCCAAGGAGTATTTGCATTCAGCTGAGTTGAGAGATATAATGCAATTCGGAAGCAGCAACACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAATTTGAAACCAAGCAGGGTGAGGAAATTTGTGTAGCTCTTCAAACACATATAAATGATGTAATGCTCCGTCGCTACTCAAAAGCACGGACTAATGCTGGTGGTTCTTTGAATGAAGATATCTCTAGTAATTTCAAGTCTCCTAATTTAGAATCATATGAGAAGCGTGTCCAAGATTTATCAAAGCTTGCTGAAGAGTATAAAAGAAATGCTGATCAATTGCGTGAAGAATTGAACGAGAAGAAAAAACAAGAAGAGAAAATGCTACAAGAGTTGGAGAGCTTGAACGAATCGTTAAATGTTGATAAGCTTAGTCTTGAGGAAGTTACAAATGACCGTGATAGGCTTATGTCATTATGTGATGAAAAAGATAAGGCTCTTCAGGCTGCAATTCTAGAGAAAAGGAACATGGAAACAAGGATGATCAAGTTGAATAAATTGGTTATAGAGAAAGAGAACACTACCCAAAATGAGCCTATTGGAGCAAATCAGCAAGTTTTGCAAAAGCTTGAAGCTGAGCTAAAACTTTGTAAAGATGAGCTTCGTGTAGCTGAAGAAACCATCAAAAGCCTGACAACTGACAAATTGATTTTGGAGCAGAGGCTGTCTAGCCTTGAGAAGAAAAATTCTGAAGAGAGTTCTTCTATTCAATTGAAACTTGAACAAGAACGCAAAACTCTGAAAGGTCAAGTTTATGACCTCGAAAGAAAAGTAGAAGTATTCAGACAAGAGTTAGTTGCTGCTGAGTCTACACTTTCAGCCAAGGACTCTGAATTGACTGCATTGAAGAGCAATTTGAGAGAGCTTGAAGAATTGAGAGAAATGAAAGAGGACATCGATAGAAAGGACAAACAAACAGCTGCCATATTGAAGATGCAAGCAGCTCAACTAGCTGACATGGAGTTGCTTTATAAAGAAGAACAAGTTTTGAGGAAGCGATATTTTAATACAATAGAAGATATGAAAGGCAAGATAAGAGTGTACTGTCGGTTAAGGCCTCTAAGTGACAAAGAGATTGCTGAGAAAGATGGAGGTTCTCTTACTACTGTAGATGAGTTTACTGTTGAACATCAATGGAAAGATGATAAACCAAAACAACACATATATGATCGTGTGTTTGATGGCAATGCTACTCAAGAAGATGTATTTGAGGATACAAGGTACTTGGTGCAATCGGCCGTAGATGGTTATAATGTCTGCATTTTTGCTTATGGTCAAACTGGTTCTGGAAAGACATTTACAATTTATGGGTCTGAAAGCAACCCTGGCCTTACCCCGCGTGCCACTGCAGAACTTTTTAGAATTTTAAGGAGAGACAGTAACAAGTTTTCATTTTCCTTGAAGGCATACATGGTGGAACTATACCAAGATACACTTGTTGATCTTTTGTTACCAAAGAATGCCAAGCGTTTAAGATTGGATATTAAGAAGGACTCAAAGGGAATGGTAGCTGTGGAAAATGTAACAACTGTGTCAATTTCTACTATGGACGAACTGAACAGCATAATACAAAAAGGATCTGAAAGGCGACATACTTCGGAAACGCAAATGAATGAAGAAAGCTCAAGATCTCATCTTATTCTATCAATAGTAATTGAAAGTACTAATCTTCAAAGTCAATCAGCTGCAAGGGGAAAGCTGAGTTTTGTGGACCTTGCTGGTTCAGAGAGAGTGAAAAAATCAGGTTCTGAAGGTAGTCAACTTAAAGAAGCACAAAGTATCAATAAGTCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCCTCTGGTGGACAACACATACCTTATAGGAATCACAAGTTAACTATGTTGATGAGTGATTCATTGGGGGGAAATGCCAAAACTCTCATGTTTGTGAATGTGTCTCCAGCACAGTCTAGCTTGGATGAGACTCATAACTCTCTTATGTATGCATCAAGGGTGAGGTCAATTGTGAATGATCCAAGCAAAAATGTTAGTTCAAAAGAGATAGCTAGGCTGAAAAAATTAGTTGCTTATTGGAAGGAACAAGCAGGTAGAAAAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATGTAAGACCTTCTAGAGATAGAACTGATGGCCGCCATTCTATGTAG 3813 0.3887 MTIDMPPSVAQSVRTNRSSFSSSFGHEDNTPLHHYSAVSNGDGYESDSSSFAPPTPNTLSTAIPAELAGVVPLIDRFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVRDKLTFEDMLCFQKDPIPTSLLKLNSDLASRSTKLFQLVLKYMGVDSSDRVSPISLDERVELVGKIYKQSLKHSELRDELFVQISKQTRNNPDRHAHFLTWELMYLCVSCMPPGKDIGGYLSEYIHHIVNGVNTGPEIRALALNTLSALKRSVKAGPRHIIPGPKEIEAQLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKAVTASKSPDSEEYVGLDDNKHIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFMQLSYVQLQHDYIFGNYPVGRDEASQLSALQILAEIGFVRRPESCSDWSSFLERFLPRQIAMTRARREWELDILSCYHSLEHLTKDDARQQFLHILRTLPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARTNAGGSLNEDISSNFKSPNLESYEKRVQDLSKLAEEYKRNADQLREELNEKKKQEEKMLQELESLNESLNVDKLSLEEVTNDRDRLMSLCDEKDKALQAAILEKRNMETRMIKLNKLVIEKENTTQNEPIGANQQVLQKLEAELKLCKDELRVAEETIKSLTTDKLILEQRLSSLEKKNSEESSSIQLKLEQERKTLKGQVYDLERKVEVFRQELVAAESTLSAKDSELTALKSNLRELEELREMKEDIDRKDKQTAAILKMQAAQLADMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSDKEIAEKDGGSLTTVDEFTVEHQWKDDKPKQHIYDRVFDGNATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSESNPGLTPRATAELFRILRRDSNKFSFSLKAYMVELYQDTLVDLLLPKNAKRLRLDIKKDSKGMVAVENVTTVSISTMDELNSIIQKGSERRHTSETQMNEESSRSHLILSIVIESTNLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAQSSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQDVRPSRDRTDGRHSM 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00280 1270 Coils Coil 730 778 - -
Aip05g00280 1270 Gene3D - 385 496 IPR014352 -
Aip05g00280 1270 MobiDBLite consensus disorder prediction 1 57 - -
Aip05g00280 1270 Pfam MyTH4 domain 173 277 IPR000857 GO:0005856
Aip05g00280 1270 ProSiteProfiles Kinesin motor domain profile. 894 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 ProSiteProfiles FERM domain profile. 284 596 IPR000299 GO:0005856
Aip05g00280 1270 SMART kinesin_4 892 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 Coils Coil 620 679 - -
Aip05g00280 1270 MobiDBLite consensus disorder prediction 1241 1270 - -
Aip05g00280 1270 SMART B41_5 280 502 IPR019749 -
Aip05g00280 1270 Gene3D Kinesin motor domain 881 1217 IPR036961 -
Aip05g00280 1270 Gene3D - 1218 1266 - -
Aip05g00280 1270 Pfam Kinesin motor domain 900 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 SMART MyTH4_1 120 279 IPR000857 GO:0005856
Aip05g00280 1270 ProSiteProfiles MyTH4 domain profile. 120 279 IPR000857 GO:0005856
Aip05g00280 1270 Coils Coil 822 855 - -
Aip05g00280 1270 ProSitePatterns Kinesin motor domain signature. 1115 1126 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip05g00280 1270 Gene3D - 500 606 IPR011993 -
Aip05g00280 1270 SUPERFAMILY Second domain of FERM 380 497 IPR035963 -
Aip05g00280 1270 PRINTS Kinesin heavy chain signature 966 987 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 PRINTS Kinesin heavy chain signature 1085 1102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 PRINTS Kinesin heavy chain signature 1116 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 PRINTS Kinesin heavy chain signature 1165 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00280 1270 PANTHER KINESIN-RELATED 615 1262 IPR027640 GO:0003777|GO:0007018
Aip05g00280 1270 Coils Coil 787 807 - -
Aip05g00280 1270 Pfam FERM central domain 388 502 IPR019748 -
Aip05g00280 1270 Gene3D - 283 384 - -
Aip05g00280 1270 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Aip05g00280 1270 SUPERFAMILY PH domain-like 502 590 - -
Aip05g00280 1270 CDD FERM_B-lobe 397 495 IPR019748 -
Aip05g00280 1270 CDD KISc_C_terminal 892 1217 - -
Aip05g00280 1270 Gene3D MyTH4 domain 99 280 IPR038185 -
Aip05g00280 1270 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1262 - -
Aip05g00280 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1244 IPR027417 -
Aip05g00280 1270 CDD FERM_C_KCBP 499 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00280 Aip-Chr5 3068013 3074547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00280 52 1265 Calmodulin-binding Proteins AT5G65930 72.884 0.0 1796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00280 - - gmx:100782701 2056.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00280 05 3068013 3074547 Aip05g00280 05 3068013 3074547 ECH