Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00279 ATGATAAGCCAAAGTGGGTCAGACAAGACACTAGTGAACACACTGAGGAACCTCCCGGGAACCCCCAGAGAGTACAGCTTTGAGGATCTGAAGAAGGCAACCAACAACTTCCATGATGTCAAGAACAAGCTAGGACAAGGTGGTTTTGGTGCTATTTACAGAGGAACACTCCCTAAGAACAAGACCCAGGTGGCTGTCAAGAAGTTCTTGAGGGACAAGATCTCTAGCACACATGATTTCTTGGCTGAGCTCACCATCATCAATTCTCTTCGTCACAAGAACCTTGTCCGCTTACTTGGATGGTGCCACAAGAATGGGATACTACTTTTAGTATATGAATACATGCCTAATGGAAGCTTAGATCATCACCTTTTCTTCAAGGAAAGGACCAACAAAACCCCATTAAGTTGGCATCTAAGATACAAGATCATATCAGGGTTGGTTGCTGCTTTGAACTACCTCCACAACGAATGCGATAAGAAAGTGATCCACAGAGATCTCAAAGCAAGTAACATCATGCTAGACTCTGACTTCAATGCACGCTTAGGCGATTTTGGTTTGGCTCGTGCAATTGAGAACGAGAAGACATCTTATGCAAATTTGCAAGGTGTTCCTGGAACTATGGGCTACATTGCACCAGAGTGCTTATACATCGGAAAGGCCACACGTGAATCCGACGTGTATGGATTCGGCGCAGTCTTGCTGGAGGTGGTGTGTGGACAGAGGCCATGGACAAAGAATTTGAACTATCAGTTTCTTGTGGATTGGGTTTGGCACTTGCACCGCGAGGGAAGGATACTAGAGGCAGTAGATCCAAGGCTAGAGAATGAGTTTGAGGCTGAAGAAGCAGAGAGGGTATTGAAATTGGGGTTAGCATGCTCTCACCCCATTGCAAGTGAGAGGCCTAAGATGCAGACAATTGTTCAGATAATATCAGGGTCAGTTCCTGTGCCTTATGTTCCACCCTTCAAGCCACCTTTTGTGTGGCCTGCCGCGGATCAAAGCGGCGCTTCCTCGGGTGATCCTTCTTCAAGTGAGCCTACAGCTGCAACTTTAGAGTGCTCTCCCATTAACACAACCTTCTTTGCTCGTTAA 1095 0.4639 MISQSGSDKTLVNTLRNLPGTPREYSFEDLKKATNNFHDVKNKLGQGGFGAIYRGTLPKNKTQVAVKKFLRDKISSTHDFLAELTIINSLRHKNLVRLLGWCHKNGILLLVYEYMPNGSLDHHLFFKERTNKTPLSWHLRYKIISGLVAALNYLHNECDKKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYANLQGVPGTMGYIAPECLYIGKATRESDVYGFGAVLLEVVCGQRPWTKNLNYQFLVDWVWHLHREGRILEAVDPRLENEFEAEEAERVLKLGLACSHPIASERPKMQTIVQIISGSVPVPYVPPFKPPFVWPAADQSGASSGDPSSSEPTAATLECSPINTTFFAR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00279 364 ProSiteProfiles Protein kinase domain profile. 38 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00279 364 Gene3D Transferase(Phosphotransferase) domain 1 115 315 - -
Aip05g00279 364 Gene3D Phosphorylase Kinase; domain 1 22 114 - -
Aip05g00279 364 CDD STKc_IRAK 44 311 - -
Aip05g00279 364 MobiDBLite consensus disorder prediction 336 351 - -
Aip05g00279 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Aip05g00279 364 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 9 327 - -
Aip05g00279 364 SUPERFAMILY Protein kinase-like (PK-like) 19 331 IPR011009 -
Aip05g00279 364 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Aip05g00279 364 PANTHER - 9 327 - -
Aip05g00279 364 MobiDBLite consensus disorder prediction 331 351 - -
Aip05g00279 364 Pfam Protein kinase domain 40 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00279 364 SMART serkin_6 38 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00279 Aip-Chr5 3066302 3067633 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00279 22 325 Receptor kinase-like Gene Family AT3G53380 50.641 1.37e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip05g00279 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00279 - - aip:107639957 684.1