Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00276 ATGGCTCCACCACCGTGGCTCTCCCTTAGCGGCGCCACCACTGCCATTCCTATCTTACCTCTATTCATCATGTTGAAGGCGGTGACTTCCCAAAACCAACTCATTTTTGGACCTTCCAATTCCTCAAAAGAAATCAGTAACATCATATATCCCATACCCGTGGCATGGATCAATTACTCATCTGGTGGTTCCCTATCCCTTCAACTCACTCCATACAGCTCCGGCAACATCCCCGTCGGCCAACTCACCAACAAATCCGATGGGATCTTCTTCACCAGATCCTTCAACCTATGGCGAAACGCTTCAAAGGGAAGAGTGGCTTCCTTCAATACTTCCTTTCTCTTCAGCATGGTTCGTGTTAACAACGTCACTCCCGCCGGCGAAGGCATGGCCTTTGTTATTGCCCCTTCTTACTCGGTTCCAATTCCACCAAACAGCTATGGCCAGTACTTAGGTCTCACTAACAACCTCAACGACGGCGACCCCTCCAACCAGATCGTAGCAATAGAATTTGATACCGTGAAGCAGGATTTCGACCCCGACGACAACCACGTAGGGCTTGACATCAACAGTGTAAGGTCCAACCTTACCTTTTCGCTTTCGCAATTCGGATTTCAGATTGCACCGAGTAACAACAATGATTCAGGGAGTTTGTACGTGGTGTGGGTGGAGTACGACGGGGTAAAGAAGGTGATCGACGTGTACATGGCAAAACAACCTCATAAGGATGGGCCCTTGGTGGAGAAGCCAATGCAGGTGATGGTGTCACAAGAAGGGGGTATTGCTCTTAGTGTAAACATTTTCTATAATGATGGGAGCAACCAAACACCTCTGAGTTGGCAACTGAGATACAAGATAAGGTTAGGGGTAGTTTCGGCAAATTATCTCCACAACGAGTACGATCAAATAGTAGTTCATAGATATCTGAAAGCGAGTAACATAATGCTCGACTCTGATTTCAATGCACGCCTAGGTGACTTTGGTTTGGCACGCGCAATTGAGAATGAGAGAACCTCGTACGCAGAGTTGGAAGGAGTGGCGGGCACAAGGGGAGTGCTTGCATACAGGCTGTGTTGCTTGAAGTGGTGTGTGGTGAGCGAGCATGGGCAAGGATTGAGGGATACAACTTGTTGGTGGATTGGGTTTGGTACCTGTATCGTGAAGGAAGCTTACTGGATGCAGTGGATCCTCGACTTAGGAATAATTATGTGGGTGAAGTAG 1221 0.4808 MAPPPWLSLSGATTAIPILPLFIMLKAVTSQNQLIFGPSNSSKEISNIIYPIPVAWINYSSGGSLSLQLTPYSSGNIPVGQLTNKSDGIFFTRSFNLWRNASKGRVASFNTSFLFSMVRVNNVTPAGEGMAFVIAPSYSVPIPPNSYGQYLGLTNNLNDGDPSNQIVAIEFDTVKQDFDPDDNHVGLDINSVRSNLTFSLSQFGFQIAPSNNNDSGSLYVVWVEYDGVKKVIDVYMAKQPHKDGPLVEKPMQVMVSQEGGIALSVNIFYNDGSNQTPLSWQLRYKIRLGVVSANYLHNEYDQIVVHRYLKASNIMLDSDFNARLGDFGLARAIENERTSYAELEGVAGTRGVLAYRLCCLKWCVVSEHGQGLRDTTCWWIGFGTCIVKEAYWMQWILDLGIIMWVK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00276 406 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 271 354 - -
Aip05g00276 406 PANTHER - 21 246 - -
Aip05g00276 406 SUPERFAMILY Protein kinase-like (PK-like) 269 405 IPR011009 -
Aip05g00276 406 ProSiteProfiles Protein kinase domain profile. 120 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00276 406 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 243 IPR013320 -
Aip05g00276 406 CDD lectin_legume_LecRK_Arcelin_ConA 66 237 IPR001220 GO:0030246
Aip05g00276 406 Gene3D - 55 258 - -
Aip05g00276 406 Pfam Protein kinase domain 294 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00276 406 Pfam Legume lectin domain 82 256 IPR001220 GO:0030246
Aip05g00276 406 PANTHER - 271 354 - -
Aip05g00276 406 Gene3D Transferase(Phosphotransferase) domain 1 266 362 - -
Aip05g00276 406 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 21 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00276 Aip-Chr5 3059923 3061491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00276 275 357 Receptor kinase-like Gene Family AT4G29050 38.095 2.74e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip05g00276 Lectin_legB 1.2e-41 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00276 - - gmx:100780014 209.92