Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00273 ATGGAGTTCCCTACCGTGGCTTGGGGGTGGGGTGCTGCTAAAGGTCTTTCTTTCTTGCATGGAGCTGACAAACCTGTCATTTACAGGGATTTTAAGACTTCCAATGTCTTGCTTGATTCCGATTTCACAGCAAAACTCTCAGACTTTGGATTAGCCAAAATGGGACCAGAGGGATCAAACACTCATGTTTCCACCAGAGTTATGGGTACCTATGGATATGCTGCCCCGGAATACATCTCAACAGTTCTTGCTGCAGAAACTACCTTTTGCTTTTCTTCTAAGGTTTATGTAGTGTACATGGGAAGCAAAACTGGGCAAGAACCAGAGGATGTTCTAAAGCAACACCATCAAATGCTTGCTGCTGTTCATGAAGGAAGTTTTGAGAAAGCACAAGCTTCTCATATTTATAGCTACAAACATGGTTTCAGAGGCTTTGCAGCCAAGTTGACTCAAGAACAAGCTTCACAAATTTCAAGAATGTCTGGAGTTGTTTCAGTTTTTCCCAATTATAAGAGAAAACTTCACACCACTCATTCATGGGACTTTATGGGACTTGAGAAGGATGAAACCATGGAGATTCTAGGACAATCCACAAAGAACCAAGCCAATATCATCGTTGGTTTCATTGATACCGGAATTTGGCCTGAATCACCAAGCTTTAGAGACACCGACATGCCAGCAGTGCCACCAAGTTGGAGGGGCCATTGTCAATTAGGAGAAACATTCAATGCATCTTCTTGTAACAGGAAAGTGATAGGAGCAAGATATTATATGAGTGGATTTGAAGCAGAAGAAGGGTCAGACAAGAAGGTCTCTTTCAGGTCCCCAAGGGATAGCACTGGACATGGGAGCCATACGGCCTCCACGGCGGCCGGCCGCTATGTGTCGAACATGAGTTACAAGGGGCTGGCAGCTGGAGGAGCCAGGGGAGGTGCACCTATGGCTAGAATTGCTGTTTACAAAACTTGCTGGGATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGAGATGGTGTTCACATTATATCATTGTCTCTGGGTCCTGAAGCCCCTCAAGGAGAGTATTTCAATGATGCCATATCAGTGGGGTCCTTTCATGCTGCTAGGCATGGAGTTCTAGTGGTGGCATCAGCTGGGAATGAAGGAACTCCTGGTTCTGCTACTAACCTTGCACCTTGGATTTTCACTGTTGCTGCTAGCTCCACTGATAGGGACTTCACCTCTGATGTTGTACTAGGAAATGGTGTCAACATCTCGGGTGAAAGTCTCAGCATCTTAGAAATGAATGCCTCCAAAAGAATAATATCTGCAGCAGATGCCTTTGATGGATATTTTACTCCTTATCAATCCAGTTACTGTGTAGATAGCTCCCTGAATAAGACCAAGGCCAGAGGGAAGGTTCTGGTGTGTAGACATATAGAGAGTTCATCAGAATCAAAGTTGGCCAAAAGTAGGGTAGTGAAAGAGGCAGGTGGTGTTGGAATGATACTCATTGATGAGACAGATAAAGATGTTGCCATACCATTTGTGATTCCTTCAGCTATTGTTGGAAGTAGAACAGGCGAACATATTCTATCATACATCAATAGAACAAGAAAGCCTATGGCGAGGATATTTGCAGCCAAGACAGTTCTAGGAACTCGACCTGCACCCCGAACAGCGGCATTCTCTTCTAAAGGCCCCAATTCCTTAAACCCAGAAATCTTGAAGCCTGATATTACAGCTCCCGGATTAAACATTCTCGCAGCATGGTCTCCGGCAGCCGTTGGAAAAATGAAGTTCAATATTATATCAGGAACTTCTATGTCTTGTCCGCATGTATCTGGAATTGCAGCATTAGTCAAAGCTGTCCATCCTTCATGGTCGCCATCTGCTATCAAATCTGCTATCATGACAACTGCTACTATTCTGGATAAGCAGCACAAACCCATTAGAAGGGACCCTGATGGAAGAAGAGCCAATGCATTTGACTATGGATCAGGGTTTGTGAACCCCACAAGAGTTCTAGATCCTGGCCTTGTCTATGATTCACAGCCAGAAGACTATATTGACTTCCTCTGTTCAATTGGTTATGATAAGAGGTCACTCCATCTTGTTACAGGAGACAACAGCACATGTGATGGGGCATTCAAGAAACCATCCAGCCTCAACTATCCATCTATTGCAGTGCCTAATCTTGAAGACAACTTTTCAGTAACACGTGTTGTCACCAATGTTGGAGAAGCAAGAAGTGTATATAAATCTGTAGTGGTTTCTCCTGCTGGAGTTAATGTCACTGTTGTGCCAGACAGGTTAATCTTCGGAAGAATTGGACAGAAAATCAAGTTCACATTGAATTTCAAAGTGGCTGCTCCTTCAAAGGGCTACACATTTGGGTTCTTGTCATGGAAGAATGGCAGGTCTCAGGTCACAACTCCTATAGTTGTCCGGGCTTCATCATCAGGCTTTGGGTTGGTCAGATAA 2481 0.4426 MEFPTVAWGWGAAKGLSFLHGADKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTVLAAETTFCFSSKVYVVYMGSKTGQEPEDVLKQHHQMLAAVHEGSFEKAQASHIYSYKHGFRGFAAKLTQEQASQISRMSGVVSVFPNYKRKLHTTHSWDFMGLEKDETMEILGQSTKNQANIIVGFIDTGIWPESPSFRDTDMPAVPPSWRGHCQLGETFNASSCNRKVIGARYYMSGFEAEEGSDKKVSFRSPRDSTGHGSHTASTAAGRYVSNMSYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGEYFNDAISVGSFHAARHGVLVVASAGNEGTPGSATNLAPWIFTVAASSTDRDFTSDVVLGNGVNISGESLSILEMNASKRIISAADAFDGYFTPYQSSYCVDSSLNKTKARGKVLVCRHIESSSESKLAKSRVVKEAGGVGMILIDETDKDVAIPFVIPSAIVGSRTGEHILSYINRTRKPMARIFAAKTVLGTRPAPRTAAFSSKGPNSLNPEILKPDITAPGLNILAAWSPAAVGKMKFNIISGTSMSCPHVSGIAALVKAVHPSWSPSAIKSAIMTTATILDKQHKPIRRDPDGRRANAFDYGSGFVNPTRVLDPGLVYDSQPEDYIDFLCSIGYDKRSLHLVTGDNSTCDGAFKKPSSLNYPSIAVPNLEDNFSVTRVVTNVGEARSVYKSVVVSPAGVNVTVVPDRLIFGRIGQKIKFTLNFKVAAPSKGYTFGFLSWKNGRSQVTTPIVVRASSSGFGLVR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00273 826 MobiDBLite consensus disorder prediction 268 288 - -
Aip05g00273 826 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 83 819 - -
Aip05g00273 826 Gene3D - 409 551 - -
Aip05g00273 826 CDD Peptidases_S8_3 173 641 IPR034197 -
Aip05g00273 826 Gene3D Transferase(Phosphotransferase) domain 1 4 89 - -
Aip05g00273 826 Pfam Protein kinase domain 12 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00273 826 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00273 826 SUPERFAMILY Protein kinase-like (PK-like) 7 81 IPR011009 -
Aip05g00273 826 SUPERFAMILY Subtilisin-like 174 679 IPR036852 GO:0004252|GO:0006508
Aip05g00273 826 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 819 IPR045051 -
Aip05g00273 826 Gene3D - 692 818 - -
Aip05g00273 826 ProSitePatterns Serine proteases, subtilase family, serine active site. 605 615 IPR023828 -
Aip05g00273 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Aip05g00273 826 Gene3D Peptidase S8/S53 domain 203 688 IPR036852 GO:0004252|GO:0006508
Aip05g00273 826 Pfam Subtilase family 203 643 IPR000209 GO:0006508|GO:0008236
Aip05g00273 826 Pfam PA domain 457 529 IPR003137 -
Aip05g00273 826 PRINTS Subtilisin serine protease family (S8) signature 604 620 IPR015500 -
Aip05g00273 826 PRINTS Subtilisin serine protease family (S8) signature 278 291 IPR015500 -
Aip05g00273 826 PRINTS Subtilisin serine protease family (S8) signature 201 220 IPR015500 -
Aip05g00273 826 ProSiteProfiles Serine proteases, subtilase domain profile. 179 675 - -
Aip05g00273 826 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 90 175 IPR037045 -
Aip05g00273 826 CDD PA_subtilisin_like 415 544 - -
Aip05g00273 826 Pfam Fibronectin type-III domain 722 815 IPR041469 -
Aip05g00273 826 Pfam Peptidase inhibitor I9 95 175 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00273 Aip-Chr5 3027858 3040592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00273 94 815 Subtilisin-like Serine Gene Family AT5G45650 43.550 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g00273 Peptidase_S8 4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00273 - - aip:107642485 1457.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00273 05 3027858 3040592 Aip05g00273 05 3027858 3040592 ECH