Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00263 ATGGCCATGGAAGGAAGAAGAATCTCTGAGGAATTGAGCCCCAGGTATTATGCTCTTTGTGCTGTTGGTGGAATGCTCAGTGCTGGCACTACCCATATTGCTCTAACTCCTCTTGATGTCTTGAAGGTCAACATGCAGGTGTACCCTGTGAAGTATTACAGCATTTCCAAGTGCTTTTCTTCCTTACTGAGGGAACAAGGGCCTTCTGCCCTTTGGAGGGGATGGACTGGCAAGTTCTTTGGCTACGGCGCACAGGGTGGATGTAGGTTCGGTCTCTATGAATATTTTAAGGGGGTTTATTCCAATGTGTTCCTAGACCAGAACAGGAACTTTGTTTACTTTCTCAGTAGTGCGTCTGCTGAAATATTTGCCAATCTAGCATTGTGCCCATTTGAAGCTGTAAAAGTGAGGGTTCAAGCGCAACCATGCTTTGCTAAGGGCTTGCACGATGGCTTTCCGAAGTTATATGCAGCAGAAGGCACACGAGGATTCTACCGTGGACTTTTTCCACTTTTGGGTCGAAACCTTCCATTTTCCATGGTTATGTTTGCAACATTTGAGCATTCCGTTGATTTTTTGTATCGTAATGTTGCTAAAAGAAGAAAGGAAGATTGTTCTATAGCTCAACAGCTTGGTGTGACATGTATAGCTGGATATGCAGCCGGATCTGTTGGTAGCTTCATTTCCAATCCTGCTGACAATATTGTATCCTCTCTCTATAACAGAAAGGCCGATAGTTTCATGCTGGCTATCAGAAAAATTGGGTTTGCCAATCTATTTACCAGGAGCCTTCCTATTCGACTTTTGCTTGTTGGTCCCTCGATAACTTTGCAATGGTTTTTCTATGACACCATCAAAGTTTTAGGCGGACTGCCGACTAGTGGCGAAGTTGCAACTGACTTGAGAGATGATGCAAGCTAG 921 0.443 MAMEGRRISEELSPRYYALCAVGGMLSAGTTHIALTPLDVLKVNMQVYPVKYYSISKCFSSLLREQGPSALWRGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVFLDQNRNFVYFLSSASAEIFANLALCPFEAVKVRVQAQPCFAKGLHDGFPKLYAAEGTRGFYRGLFPLLGRNLPFSMVMFATFEHSVDFLYRNVAKRRKEDCSIAQQLGVTCIAGYAAGSVGSFISNPADNIVSSLYNRKADSFMLAIRKIGFANLFTRSLPIRLLLVGPSITLQWFFYDTIKVLGGLPTSGEVATDLRDDAS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00263 306 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Aip05g00263 306 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 304 IPR044677 GO:0005315|GO:1990547
Aip05g00263 306 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
Aip05g00263 306 Pfam Mitochondrial carrier protein 21 101 IPR018108 -
Aip05g00263 306 Pfam Mitochondrial carrier protein 109 196 IPR018108 -
Aip05g00263 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Aip05g00263 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Aip05g00263 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Aip05g00263 306 PANTHER PHOSPHATE CARRIER PROTEIN 4 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00263 Aip-Chr5 2844577 2848237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00263 1 297 Chloroplast and Mitochondria Gene Families AT2G17270 68.121 6.42e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00263 K15102 - gmx:100788561 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00263 05 2844577 2848237 Aip05g00263 05 2844577 2848237 ECH