Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00256 ATGAAAATTTGTCTCTTCATCTTCCCTTTCTTCGTGTTGTCGATTCTTGCACCTCAAATATCCTTCTCAGATTCACACGCCTCTCAGCTCTCTCTTCTCCACCACCATACCAACCGTCAACCTGCTACGGGCCTCATTGCAGCCCTAGATGGCACTCTCTATCTGCTCGACACTGATTCCGGCAGGGTAATTTGGTCATTCTCCACTGGTTCCCCCATCTACCATTCCTACCAGGCACCTCTCAATTCCGCCAATGAATCTGGACTCATCGAATGCGGTGATGATTGGGAACTCATCCTTCATCACAACCACTTTGGTAAAACGAGGCTCTCGGAATCTATTGCTGATTATGTTGCGGATACGCCTGTTATGTCAGAAGATGGGGCAGTTGTTCTTGGATCCAAAAGAACAACTGTCTTTGAAGTTGATGCTAAAACCGGAAGGCTTGTAAGAAGTTATACCACTGCAGCCTTTGATGATTCGTCCGCCGCCGGGTGGAGTGATGACAGGAAGAATGTGACTACTGACATTGGTACAAGCAGTAGTGAGCTTGCTGATCCTGCGCAGCTTAATCCGCCGGATTTTTTACTCAAGATATTTAGGACTGATTATCTTTTGCAATCTGTTGGTCCTGGATCTGGAATGGTTTTGTGGACCATGAAAGTAGCTGAATTTAAGGCTGTATTACATTGCCAACATGATGAGTATCCATCTGACAGGGTGTCATTCGAGGCAGGAGGTCAATATGCTTTCGACAGTGGCTTACGTTTTGCTATGCCGTATGCATGTCATGACAGAAAACTAAAAGATGTCTATCGCCAAAGGAAGAATTTTCTGCTAGAACATGGTAACCCTGAAAGATTATCCGAGGGTTATAAAGAGTGTGATATGCTCCCAACCCCTTCTTCAGAACTGATGCTTCCATTGCAACCTAATAAAAATAGGGTTCCCCATGGTCCTAATAGTAAAATGATGCATTCTGGGGACGTGCTAAATCATTTGCCTGCTTTGCCACCGAAAATCAACTATGATAATAATGATCATGCAGTAATGCTCTACCAGTTTCCTATGGATATGGCTGGACCTGGTAAAATTGATGTGAGCAAGGGGATTGAATGGTCAACATCAGCTCTTATATTGTTTATAGGATTTATTCTCTGCGTTTTGATCTTCTGCTTCTGCCTTAGGAAAAAGAGAGTGCAGAAGGACCAAAACATTGAGGCAATTTTAAAAAATCATTCTTCTAAGAAAAAGAGAGCACGTAAGTCTGGAAGGAATGCCATCGTTGTTGACAAACAGGATAGGAATTCATTGCCAGCTGAGGAGGATATATTGACAAATAATGTTGATGGACGGAAGATTGGTAAACTAATTGTACTAAACAAAGAAATTGCTAAGGGTAGTAATGGTACCATTGTTCTGGAGGGGATATATGAAGGTCGGGAAGTTGCTGTCAAACGTCTTGTTCAAGCTCATCATGATGTAGCCAGCAAAGAAATCCAAAACCTTATTGCATCTGATTGCCATCCAAACATTGTTCGATGGTATGGGGTCGAATATGATAATGATTTTGTTTATCTTGCTTTGGAGCGTTGTATATGCAACTTGGATGATTTGATTCAAAATTACTCTGATATATCAGAAAACCCAGTGCATAGCAAGGATCAAGGTTCTAAGATTGTTATAAAGGCTCAGGTGGAGACAGGGAAGGATGATGTGCAATATCTTTGGAAAGCAAATGGCCATCCATCATCGCTATTACTTAAACTAATGAGGATGTGGGAGTTCAGGGTGGCAGGCACCAGAGCAGCTTGTTCAAGGACGCCAATCACGAGCTTTAGATTTGTTTAG 1851 0.4246 MKICLFIFPFFVLSILAPQISFSDSHASQLSLLHHHTNRQPATGLIAALDGTLYLLDTDSGRVIWSFSTGSPIYHSYQAPLNSANESGLIECGDDWELILHHNHFGKTRLSESIADYVADTPVMSEDGAVVLGSKRTTVFEVDAKTGRLVRSYTTAAFDDSSAAGWSDDRKNVTTDIGTSSSELADPAQLNPPDFLLKIFRTDYLLQSVGPGSGMVLWTMKVAEFKAVLHCQHDEYPSDRVSFEAGGQYAFDSGLRFAMPYACHDRKLKDVYRQRKNFLLEHGNPERLSEGYKECDMLPTPSSELMLPLQPNKNRVPHGPNSKMMHSGDVLNHLPALPPKINYDNNDHAVMLYQFPMDMAGPGKIDVSKGIEWSTSALILFIGFILCVLIFCFCLRKKRVQKDQNIEAILKNHSSKKKRARKSGRNAIVVDKQDRNSLPAEEDILTNNVDGRKIGKLIVLNKEIAKGSNGTIVLEGIYEGREVAVKRLVQAHHDVASKEIQNLIASDCHPNIVRWYGVEYDNDFVYLALERCICNLDDLIQNYSDISENPVHSKDQGSKIVIKAQVETGKDDVQYLWKANGHPSSLLLKLMRMWEFRVAGTRAACSRTPITSFRFV 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00256 616 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 6 592 - -
Aip05g00256 616 Gene3D - 38 249 IPR015943 GO:0005515
Aip05g00256 616 SMART ire1_9 122 154 IPR018391 -
Aip05g00256 616 SMART ire1_9 37 68 IPR018391 -
Aip05g00256 616 PANTHER IRE1-RELATED 6 592 IPR045133 GO:0004521|GO:0004674|GO:0030968
Aip05g00256 616 Gene3D Transferase(Phosphotransferase) domain 1 442 568 - -
Aip05g00256 616 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 48 160 IPR011047 -
Aip05g00256 616 ProSiteProfiles Protein kinase domain profile. 458 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00256 616 Pfam PQQ enzyme repeat 48 74 IPR002372 -
Aip05g00256 616 SUPERFAMILY Protein kinase-like (PK-like) 458 549 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00256 Aip-Chr5 2776485 2780770 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Aip05g00256 PQQ 4.1e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00256 K08852 - gmx:102661527 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00256 05 2776485 2780770 Aip05g00256 05 2776485 2780770 ECH