Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00254 ATGGCAACTGGTTCAGGATCAATTATATGGAAGACACAGTTGGCCATGTTAATGGCACCCCTAATCTATGGAGGTTACAATGTTGTCACCAAAGTGGCACTCAATGATGGTGTCAACCAGCTTGTCTTCTGTGTCTTCAGGGATCTCATTGCCCTTTCTGTTCTTGCTCCTGTTGCTTATTTCCATGAAAAGCATATGCGACCACCCATTACTAAGAAGCTATTATTGTCATTCTTCTTGCTTGGATCACTTGGGATATTTGCCAACCAGCTTCTGTTTCTTATTGGTCTAAAGTATACCAATGCAACATATGCTGCTGCCACACAGCCAGCCATTCCGGTCTTTACATTTCTGTTTTCTGCAATAATGGGGGTAGAAAAAGTGAACTTGCTAAGATATGAAGGGTGGGCAAAGGTTGGAGGGACTATTATCTGTGTCTTTGGTGCCTTGTTGATGGTGTTCTATCGCGGTCCAGTTGTGATAGGAAATGAAGAAATAGTAATGAAAAATGCATCTCAAACTGAGCCATCTGGATGGTTAATTGATGGTTTGCAACATATAGGATTTGATCAATTCAGTCTTGGTGTTATGTGCTTAATAGGTAACTGCATGTGCATGGGTGCTTATCTAGCCATTCAGGCACCGCTATTGAGAAAGTACCCCACAAATATATCTCTCACAGCATATTCCTACTTCTTTGGAGCTGTATTGATGGTGATAGTATCAATGTTTATGACTAATGGGATTACTGACTGGACTCTAACAGGGTCCGAAATTCTTGCTGTTATTTATTCTGGAGTTATTGCATCTGCCCTTGGTTATGCACTTATTACATGGAGCAGTAAGATCTTGGGACCAACCATGGTTTCCCTATATATCTCCCTTCAACCTGCATGTGCTACTATCCTTTCCCTAATTTTTCTTGGAAGTGCTGTCTACTTGGGAAGTATCTTGGGAGGAACATTTATCATCGCTGGCCTATACATTGTTACTTGGGGATCATACAGAGAAAGACAGACAGAAGCGAATGATGGAGTTATTCCCTATGAATTTTGTGTTTCAGAGCCACTGATTCAGAAACAGCCAACATTTTAG 1095 0.4119 MATGSGSIIWKTQLAMLMAPLIYGGYNVVTKVALNDGVNQLVFCVFRDLIALSVLAPVAYFHEKHMRPPITKKLLLSFFLLGSLGIFANQLLFLIGLKYTNATYAAATQPAIPVFTFLFSAIMGVEKVNLLRYEGWAKVGGTIICVFGALLMVFYRGPVVIGNEEIVMKNASQTEPSGWLIDGLQHIGFDQFSLGVMCLIGNCMCMGAYLAIQAPLLRKYPTNISLTAYSYFFGAVLMVIVSMFMTNGITDWTLTGSEILAVIYSGVIASALGYALITWSSKILGPTMVSLYISLQPACATILSLIFLGSAVYLGSILGGTFIIAGLYIVTWGSYRERQTEANDGVIPYEFCVSEPLIQKQPTF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00254 364 PANTHER WAT1-RELATED PROTEIN 13 361 - -
Aip05g00254 364 PANTHER WAT1-RELATED PROTEIN 13 361 IPR030184 GO:0016021|GO:0022857
Aip05g00254 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 337 - -
Aip05g00254 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Aip05g00254 364 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Aip05g00254 364 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00254 Aip-Chr5 2741123 2743724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00254 95 363 Nodulin-like Gene Family AT5G45370 54.874 8.75e-106 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00254 - - aip:107642467 502.671