Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00249 ATGCCACAAAACTGCATAGCACCAAAACCAGAATACAACACTAGTAGTAGTAGTAGTACTCATCATCACTCTATGGAATCAGCCTTAGAGAATAATAATACCAATGAACAACAATCCATACAAAAACTCACTATGTTCCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTGAAACTAGAACAGAAAGGAGGATGTTGGGGAAGCAACAAATGGAGCTGCAAAGAGAAAACAATTCTGAATGGAATCAGTGGTTGTGTTTGCCCTGGTGAGATTCTTGCTATGCTTGGCCCTTCAGGGAGTGGCAAAACCACACTCCTTACAGCTCTCGGAGGCCGTCTCGCCGGAAAACTCTCCGGCAAGATAACATACAACAACAATCCATTCTCAGGTTCAATCAAGAGAAGAACAGGTTTTGTAGCACAAGATGATGTTCTATATCCTCACCTAACTGTAACTGAAACACTATTCTTCACTGCACTTCTAAGGCTTCCAAAGACTTTAACAAGAGATGAGAAGGTTCATCATGTTGAGAGAGTGATCAGTGAATTGGGATTAACAAGGTGTAGGAGCAGCATGATTGGAGGACCTTTGTTCAGAGGAATTTCTGGTGGAGAAAAGAAGAGAGTTAGTATTGGACAAGAAATGCTTATTAATCCTAGCTTGTTGCTTCTTGATGAGCCTACTTCTGGTTTGGATTCCACAACTGCTCAGAGGATCTTGAACACTATTAAGAGACTCGCCGGCGGCGGAAGAACCGTTATAACCACCATTCACCAGCCATCTAGCAGGCTATACTACATGTTTGACAAGGTTGTGTTGCTCTCTGAAGGCTCTCCTATTTACTATGGTCCTGCTTCCACTGCTTTGGACTATTTCTCTTCACTTGGATTCTCTACTTCTGTCACTGTTAATCCTTCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCTCCAGATTCAAAGCATGCAAGTGAACAAAGTGAGGGATTAGAACAAGAAAGGAAGCAAGTTAGAGAAGCACTAATATCAGCTTATGATAAGAACATAGCAACAAAGCTGAAAGCTGAGCTGTGCAGTGTTGAGGTGAACAACTACAACAACATGATGATCAAAGATGCTTGTGCAAGGAATCAGATAAATCAGGAGCAATGGTGCACAAGTTGGTGGCATCAGTTTAAAGTACTATTGCAGAGGGGAGTGAGGGAGAGAAGGTTTGAAGCATTCAATAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACCCCAGAATCACACATTGAAGATCGGGTAGCATTGCTGTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTATACAATGCAGTATTCACATTCCCACAAGAGAGGAGAATGCTGATAAAGGAAAGATCTTCAGGAATGTACAGGCTCTCTTCCTACTTCTTAGCAAGAACAATAGGAGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTGTTCATAATCTATTGGATGGGAGGACTCAAACCTGATCCTGTTACATTCATCCTTTCTCTTCTTGTTGTTCTCTACAGTGTCCTTGTTTCTCAAAGCTTAGGCTTAGCATTTGGTGCTATATTAATGGAGATCAAACAAGCAACCACTCTAGCTTCTGTCACAACCCTTGTGTTCCTCATTGCTGGTGGATACTATGTTCAACAGATTCCACCTTTTATAGTGTGGCTAAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACACTCAAGATGATTACTATGAATGCTCAAAGGGTGTGATGTGCAAGGTTGCTGATTTTCCACCAATCAAATCAATGGGATTGAATCATCTTTGGGTTGATGTTTGCATTATGGCACTTATGTTGGTTGGTTATAGACTAATTGCTTATTTAGCACTCAGTAGAGTAAGGTAG 1965 0.4137 MPQNCIAPKPEYNTSSSSSTHHHSMESALENNNTNEQQSIQKLTMFPITLKFEELVYKVKLEQKGGCWGSNKWSCKEKTILNGISGCVCPGEILAMLGPSGSGKTTLLTALGGRLAGKLSGKITYNNNPFSGSIKRRTGFVAQDDVLYPHLTVTETLFFTALLRLPKTLTRDEKVHHVERVISELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLAGGGRTVITTIHQPSSRLYYMFDKVVLLSEGSPIYYGPASTALDYFSSLGFSTSVTVNPSDLLLDLANGIAPDSKHASEQSEGLEQERKQVREALISAYDKNIATKLKAELCSVEVNNYNNMMIKDACARNQINQEQWCTSWWHQFKVLLQRGVRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYTQDDYYECSKGVMCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLIAYLALSRVR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00249 654 MobiDBLite consensus disorder prediction 8 36 - -
Aip05g00249 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 652 - -
Aip05g00249 654 Gene3D - 71 297 IPR027417 -
Aip05g00249 654 Coils Coil 322 342 - -
Aip05g00249 654 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Aip05g00249 654 MobiDBLite consensus disorder prediction 1 36 - -
Aip05g00249 654 CDD ABCG_EPDR 47 285 - -
Aip05g00249 654 SMART AAA_5 90 280 IPR003593 -
Aip05g00249 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 296 IPR027417 -
Aip05g00249 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 303 IPR003439 GO:0005524
Aip05g00249 654 Pfam ABC-2 type transporter 393 598 IPR013525 GO:0016020|GO:0140359
Aip05g00249 654 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Aip05g00249 654 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 18 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00249 Aip-Chr5 2694219 2697501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00249 80 280 Calmodulin-binding Proteins AT2G36910 29.717 7.35e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00249 K05681 - gmx:100794774 1118.99