Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00228 ATGGTAGCTCATGTCAGTGATTTCGGCTTAGCAAGGTTGCTTTCAACCATTGGAGTGTCTCATATTGAAAGTAGTATAATTGGACCAAAGGGAACTATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTAAGGTGTCAATTGAAGGTGATATGTATACTTTTGGATTTCTAATTTTAGAAATGTTAACCGGAAAAAGACCAACAGATGAAATGTTCAAAGATGGTTACGATCTTCGTAGTTATGTCGAAATGTCACTTCCACATGACATTTTGAACATTTTGGATCTAACTATATTACATGAGGAATCAAAACAAGCTGCAAAAAGAATTGATGAGGACCTAATAGGCCTTATGCATGCTAATGCAGAGAATTGTTTGCTTTCACTCTTTAGGGTTGGACTTGCTTGTTTCAGTGGATTCACCAAATAG 432 0.3704 MVAHVSDFGLARLLSTIGVSHIESSIIGPKGTIGYAPPEYGMGSKVSIEGDMYTFGFLILEMLTGKRPTDEMFKDGYDLRSYVEMSLPHDILNILDLTILHEESKQAAKRIDEDLIGLMHANAENCLLSLFRVGLACFSGFTK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00228 143 PANTHER OS04G0122200 PROTEIN 1 138 - -
Aip05g00228 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00228 143 PANTHER LRR RECEPTOR-LIKE KINASE 1 138 - -
Aip05g00228 143 Pfam Protein kinase domain 5 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00228 143 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Aip05g00228 143 SUPERFAMILY Protein kinase-like (PK-like) 2 92 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00228 Aip-Chr5 2400647 2401169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00228 1 137 Receptor kinase-like Gene Family AT3G47570 45.324 7.70e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip05g00228 Pkinase 8.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00228 - - aip:110262720 287.73