Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00226 ATGAAGACCATCAACGACGATGCTTCCGCACAAGATCTCGACCCTCAAAGCGACCACAGCTCCGAATACCTTCTTACTTCTAACCCTCAGCCCCGCCGTCCCCGCGGCTTCGCTGCAGCCGCCGCCAATCCTGCCGGAAAGGGGAAGAAAGAGAGGGAGAAGGAGAAGGAGCGCACTAAGCTCCGCGAGCGTCACCGCCGTGCCATCACTAGCCGTATGCTTGCCGGTCTCCGGCAGTACGGGAACTTCCCTCTCCCGGCGCGTGCTGACATGAACGACGTACTCGCTGCACTCGCGCGTGACGCCGGTTGGGTTGTTGAAGCTGATGGCACCACCTACCGGCAATGTCCTCCACCTTCTCACGTGGGATCTTTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGGTGGTTCCTTGAGACCTTGCTCTGTTAAAGAGACACTAGGGAATCAGCCACCGGCACTTAGAATTGATGAATGCTTGTCGCCTGCGTCGATAGATTCTGTGGTAATTGCAGAAAGGGACTCGAAGAATGAGAAATACACAAGTGCAAGCCCTGTAAATGTAGTCCACTGTTTGGAGGCCGATCAGCTCATACATGATATTCATTCTGGTGTGCACGAGAATGACTTTACCTGCACACCATATGTTCCGGTTTACTCAAAGCTACCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGCATTAGACAAGAGCTAATTCATCTTAAGTCTTTAAATATGGATGGCGTCATTGTGGATTGTTGGTGGGGTATTGTTGAAGGCTGGAATCCGCAGAAATATGTGTGGTCTGGCTATAGGGATCTTTTTAGCATTATTAGAGAATTTAAGCTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGGTTCTAGTGATGCATTGATTGCCCTGCCACAATGGGTTTTGGATATGGGAAAAGATAACCCGGATATATTCTTTACAGATCGTGAAGGGCGGAGGAATACTGAATGCCTTTCCTGGGGAATTGACAAAGAGCGTGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTCAGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCAGTAGAAATTGGACTTGGTGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGATGGAGGTATCCTGGAATAGGCGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCATGGCAGCCAAATTACGTGGTCATTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGAGGTTCCTGCTGTATACTGGTGGTATAA 1398 0.4771 MKTINDDASAQDLDPQSDHSSEYLLTSNPQPRRPRGFAAAAANPAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALARDAGWVVEADGTTYRQCPPPSHVGSFAARSVESQLSGGSLRPCSVKETLGNQPPALRIDECLSPASIDSVVIAERDSKNEKYTSASPVNVVHCLEADQLIHDIHSGVHENDFTCTPYVPVYSKLPAGIINKFCQLIDPEGIRQELIHLKSLNMDGVIVDCWWGIVEGWNPQKYVWSGYRDLFSIIREFKLKLQVVMAFHECGGNGSSDALIALPQWVLDMGKDNPDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRMAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGSCCILVV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00226 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 272 290 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 409 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 315 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 265 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 Pfam BES1/BZR1 plant transcription factor, N-terminal 46 193 IPR008540 -
Aip05g00226 465 Gene3D Glycosidases 207 461 - -
Aip05g00226 465 PANTHER BETA-AMYLASE 8 51 458 - -
Aip05g00226 465 MobiDBLite consensus disorder prediction 46 63 - -
Aip05g00226 465 MobiDBLite consensus disorder prediction 1 63 - -
Aip05g00226 465 Pfam Glycosyl hydrolase family 14 236 428 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 PANTHER - 51 458 IPR001554 GO:0000272|GO:0016161
Aip05g00226 465 MobiDBLite consensus disorder prediction 1 28 - -
Aip05g00226 465 SUPERFAMILY (Trans)glycosidases 211 459 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00226 Aip-Chr5 2388400 2393136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00226 59 458 Glycoside Hydrolase AT5G45300 72.319 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aip05g00226 Glyco_hydro_14 1.9e-51 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00226 K01177 - gmx:100777004 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00226 05 2388400 2393136 Aip05g00226 05 2388400 2393136 ECH