Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00225 ATGAAGCCTGTCTCTCTTGTCTTCTCCACATTATTTTGGTACGAATACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACATTAGTAGTAGTAGTAGTAGTAGTACTAGTGCCCACGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAATGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAAATTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATCCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTAATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTATGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGAAATCGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGTAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTAATCTTACATCCCTCACTTCCCTAGTGTTGATTTCTAATAACTTGGAGGGGAATATTCCACAACAATTATGTGCCTTGCAAAACTTGACATATTTATTAGTCGATTTGAACGAATTTTCCAGTACACTTCCGTCTTGTCTTTACAATATATCATCTCTTAGTGTGTTATCAGTTTCAAACAATAATATTAGTGGCTCTTTGCCGGCCAACATTTTCCATAACCTCCCAAATCTTCAATTTTTCCAAATTGGAACTAACAATTTCTCTGGAACAATTCCACTTTCTGTCACAAATGCATCTTTACTACAAGTACTTGATTTGGATCGAAACCATTTTGTGGGACAAGTTCCAAGCCTAGGGAAGCTAACAAAACTTCGATTTCTATCTGTATCTGAGAACAATCTAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCATTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGTAATTTGTCTACACACTTGAGCAATCTCTTTCTTGGTTATAACCAAATATATGGAAAAATTCCTGCAGAGTTAGGAAATTTGGGGTACTTAACTCTCTTGAGCATGCAAGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAATTAATAGAGTTGGGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAGCTTACAACACCTTAATTTTTCCAAGAACAATCTCAGCGGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAACTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGTGTGTCTAAGTTTGGAGTTCCTTTATCTGCAAGGGAATTCATTCTCCGGAACCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCCGGGTCGATTCCTGAAGGCTTGCAGAACATTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTGGTTGGCAAAGTACCAACAGAAGGTGTTTTCAGAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCAGAATTTCAAGTTGTTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCTCTTTTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATTGAACTGCTGTCTAAGGTTTCCTATCAAAGCCTACACAATGGAACAAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGTTGATGTTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGGAATTTCAAATCAAAGTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCCGCATTTCATTATCTTCACTATGAATGCAATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATGTTCTTCTCGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGATTAGCAAGACTACTTGAGAAGAATATTGGAGAGTCTTCTATGCAAACTAGCTCAACTGGACTTAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGGGTCCATGGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATGTTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCTTGTATCCTTTCCATGGGAGAACAACTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCCTGTTCAATGGAATCACCAAATGAAAGAATGGCTATGGTTGATTTAATGAGAGAGCTTAATCGAATCAAAAGTTGTTTTCCTTCTACTCAACTCATGGAAGCAGATCAGAACATTCATAAACTCGTAAGTGCATTGTTTTGTATTCTTTCCCCTTAG 3168 0.3838 MKPVSLVFSTLFWYEYIIHFFLITTLNSSLLWFISNISSSSSSSTSAHALLLGNESDHLALLKFKDSISNDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELKLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLNNNSLTGEIPINLTSCYELTNFDFSWNNLIGNIPIEIGSLSKLKEFFIESNNLSGRIPPSIGNLTSLTSLVLISNNLEGNIPQQLCALQNLTYLLVDLNEFSSTLPSCLYNISSLSVLSVSNNNISGSLPANIFHNLPNLQFFQIGTNNFSGTIPLSVTNASLLQVLDLDRNHFVGQVPSLGKLTKLRFLSVSENNLGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGNLSTHLSNLFLGYNQIYGKIPAELGNLGYLTLLSMQGCRFDGNIPATFGQFQKMELIELGGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQSLQHLNFSKNNLSGTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKLSENNLVGNIPASIAVCLSLEFLYLQGNSFSGTIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNISLEYLNISFNMLVGKVPTEGVFRNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHQNFKLFVVIVCVCAFFFFLSLFLTICWMRKRSKKMSSDDSPTIELLSKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESVDVVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTGISNQSAARSLNLEQRFNIINDVASAFHYLHYECNRAIIHRDLKPSNVLLDDLMVAHVGDFGLARLLEKNIGESSMQTSSTGLKGTFGYAPPEYGMGYQGSMEGDMYSFGILILEMLTGKRPTDEMFMDGHNLHKYVEVSISSNIFKIVDPCILSMGEQLQPGVENCLISLFKVGLACSMESPNERMAMVDLMRELNRIKSCFPSTQLMEADQNIHKLVSALFCILSP 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00225 1055 ProSitePatterns Protein kinases ATP-binding region signature. 736 761 IPR017441 GO:0005524
Aip05g00225 1055 Gene3D Ribonuclease Inhibitor 295 359 IPR032675 -
Aip05g00225 1055 ProSiteProfiles Protein kinase domain profile. 730 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00225 1055 Pfam Leucine rich repeat N-terminal domain 55 94 IPR013210 -
Aip05g00225 1055 Gene3D Ribonuclease Inhibitor 206 294 IPR032675 -
Aip05g00225 1055 Gene3D Ribonuclease Inhibitor 53 205 IPR032675 -
Aip05g00225 1055 SUPERFAMILY Protein kinase-like (PK-like) 711 1023 IPR011009 -
Aip05g00225 1055 Gene3D Transferase(Phosphotransferase) domain 1 814 1046 - -
Aip05g00225 1055 Gene3D Phosphorylase Kinase; domain 1 712 813 - -
Aip05g00225 1055 PANTHER LRR RECEPTOR-LIKE KINASE 42 1033 - -
Aip05g00225 1055 Pfam Protein tyrosine and serine/threonine kinase 733 966 IPR001245 GO:0004672|GO:0006468
Aip05g00225 1055 SUPERFAMILY L domain-like 395 649 - -
Aip05g00225 1055 Gene3D Ribonuclease Inhibitor 360 668 IPR032675 -
Aip05g00225 1055 SMART serkin_6 730 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00225 1055 SMART LRR_typ_2 219 243 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 539 563 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 491 514 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 267 291 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 466 490 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 587 610 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 147 171 IPR003591 -
Aip05g00225 1055 SMART LRR_typ_2 339 362 IPR003591 -
Aip05g00225 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 865 877 IPR008271 GO:0004672|GO:0006468
Aip05g00225 1055 PANTHER OS04G0122200 PROTEIN 42 1033 - -
Aip05g00225 1055 Pfam Leucine rich repeat 566 623 IPR001611 GO:0005515
Aip05g00225 1055 SUPERFAMILY L domain-like 55 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00225 Aip-Chr5 2383888 2387323 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00225 54 1030 Receptor kinase-like Gene Family AT3G47570 46.247 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip05g00225 PK_Tyr_Ser-Thr 7.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00225 - - gmx:100792724 1202.19