Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00221 ATGCACCTTCGATTCAACCCGTTGAGCATTTTCCACCTCATTCTTTGTTTCAGAATGATAGATTGCACAAAATGGTTATGCCTTCTATTTTGTGTACTTCTATTGCTGAAGGCAGAAGCTTCTTATGTTCCAATCACTTTTGTCCAGAATGCGGTCACAAAAGGAGCCGTTTGTTTGGATGGGAGTGCACCAGCTTACCATCTTGATAGGGGATTCGGAGAAGGGATAAACAATTGGTTAGTTCAGTTTGAGGGTGGGGGATGGTGCAACAATGTTACTACTTGCCTTGGTCGAAAGAACGGTCGTTTAGGTTCATCTAAGAAAATGGCCAAGCAAATTGCCTTTTCAGGGATTTTAAATAACAGAAGAATTTTTAATCCAGATTTCTACAATTGGAACAGAGTCAAGGTTAGGTACTGTGATGGTTCTTCATTTACTGGTGATAAGGAAGAAGTTAATCCAACAACTCAATTGCACTTCAGAGGGGCAAGGGTTTTTGCTGCTGTCATGCAGGATTTACTTACAAAAGGAATGAAAAATGCTCGAAATGCTATCATATCTGGATGTTCAGCTGGAGGATTGACTTCGATATTGCATTGTGATCGCTTCCGAGCTCTATTGCCTGCAGGAGCTAAAGTTAAATGCCTTTCAGATGCCGGTTACTTTATTAACACACGGGATGTCTCTGGAACACAACACATTGAACAATTCTTCAGTCAAATTGTTGCAACACATGGCTCTGCGAAGAATTTGCCTCCGTCCTGCACTTCAAGACTTAGTCCAGGGCTGTGCTTCTTCCCACAGTATTTGGTATCCCAAATCAAAACACCAATCTTCTTTGTGAATGCAGCATATGACTCATGGCAGATTAAGAACATTCTGGCACCAGGAGTTGCCGATCCTGAAGGCCATTGGCATAGCTGCAAACTTGATATAAATAACTGTTCACCTGATCAACTTGAATTAATGCAAGGGTTTAGGACACAGTTCCTAAGGGCACTGACTGTGTTAGGAAACTCTCCATCCAAAGGAATGTTCATAGACTCATGCTATGCCCATTGCCAAACTGAAATGCAGGAAACATGGTTCAGAACTGACTCTCCCCTGTTGAACAAGACAACAATTGCGAAGGCTGTAGCAGATTGGTTCTTTGAACGAAAGCCTTTCCGGCAGATCGATTGTGCTTACCCTTGCAATCCCAGCTGCCACAACCGTGTCTTCGAACCACAAGACCAACCAGAAAAAAATGTCACCACCAAAGGAACTTCAGATGCATCATCAAGAAATCCAAATCCATGGTTCCCAAAGTTATCAAACAAGGGAAAACGGATGGAGCTTTTGTGCATCAAACAATGGATAAGTGGCCTTCTTCCAACCTTGCTTATTCTGacctctctctcactgtcaggccctctctgcctctccactgacgaaaccttctcctctttCCTCCTCAACCACCTCCTTCAAACCCTATCTACCCTCAACCGCGGCGTCGCTCGCAAGAACGCGTTCGATTCCCTCATTACGCGCCTCTGTAAGCTCCAGCGCGTCGATAACGCGCTCCAAGTGCCGTACCGACGCCGGAGGCTGCTGCCCCAATGCGACCACCTTCTACCTCGTTCTAAACATCCTAACGCGCTAGAAAGCCATAGACCACGCGCGGTGCGTGGTGGATTTCATGTCCACGCTTGA 1695 0.4336 MHLRFNPLSIFHLILCFRMIDCTKWLCLLFCVLLLLKAEASYVPITFVQNAVTKGAVCLDGSAPAYHLDRGFGEGINNWLVQFEGGGWCNNVTTCLGRKNGRLGSSKKMAKQIAFSGILNNRRIFNPDFYNWNRVKVRYCDGSSFTGDKEEVNPTTQLHFRGARVFAAVMQDLLTKGMKNARNAIISGCSAGGLTSILHCDRFRALLPAGAKVKCLSDAGYFINTRDVSGTQHIEQFFSQIVATHGSAKNLPPSCTSRLSPGLCFFPQYLVSQIKTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLELMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRTDSPLLNKTTIAKAVADWFFERKPFRQIDCAYPCNPSCHNRVFEPQDQPEKNVTTKGTSDASSRNPNPWFPKLSNKGKRMELLCIKQWISGLLPTLLILTSLSLSGPLCLSTDETFSSFLLNHLLQTLSTLNRGVARKNAFDSLITRLCKLQRVDNALQVPYRRRRLLPQCDHLLPRSKHPNALESHRPRAVRGGFHVHA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00221 564 PANTHER NOTUM-RELATED 22 425 IPR004963 GO:0016787
Aip05g00221 564 MobiDBLite consensus disorder prediction 411 434 - -
Aip05g00221 564 PANTHER PECTIN ACETYLESTERASE 22 425 - -
Aip05g00221 564 MobiDBLite consensus disorder prediction 407 434 - -
Aip05g00221 564 SUPERFAMILY alpha/beta-Hydrolases 155 288 IPR029058 -
Aip05g00221 564 Pfam Pectinacetylesterase 37 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00221 Aip-Chr5 2345182 2355200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00221 19 413 Carbohydrate Esterase AT4G19420 62.093 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00221 K19882 - gmx:100776478 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00221 05 2345182 2355200 Aip05g00221 05 2345182 2355200 ECH