Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00214 ATGAAGCAACCATCATCATGGAGGCCATTCACAACAAATTGTTGCTCAACAGAGGACCAAACCATATTCACAGGGTTCAGCAAATGCAAGCCGTCACGCTCCGATTTATCGAAGGACGTGGCGCCGTTACCGTCTTTTAGGAGGTTATCATTCTCGGAGCTTAGCCGTTCATCGTCCATAAGGATCAATGAGGAGCTTTCGCTGTCGTTTGGTCCGGATTTGTATGATTTTGAGCTGAGTGAATTGCGCGCCATAACTCAAAATTTCTCGAGCAATTTCTTGCTTGGTGAGGGTGGATTCGGAACCGTGCATAAAGGGTATGTTGATGATAATTTGAGGCAGGGTTTGAAGGCTCAACCTGTTGCTGTTAAGCTTCTTGACATTGAAGGATTACAAGGACACCGTGAATGGCTTGCAGAAGTGATATTCCTTGGGCAGCTAAGGCACCCCAATTTGGTTAAGTTGATTGGTTACTGTTGCGAGGATGAAGACCGCTTACTCGTCTACGAATTCATGCCACGTGGAAGCTTGGAGAATCACTTGTTCAGAAGGCTAACATCACTTCCATGGGGAACAAGATTAAAAATTGCCATAGGTGCTGCTAAAGGTCTTTCTTTCTTGCATGGAGCTGACAAACCTGTCATTTACAGGGATTTTAAGACTTCCAATGTCTTGCTTGATTCCGATTTCACAGCAAAACTCTCAGACTTTGGATTAGCCAAAATGGGACCAGAGGGATCAAACACTCATGTTTCCACCAGAGTTATGGGTACCTATGGATATGCTGCCCCGGAATACATCTCAACAGGGCATTTGACCACAAAAAGTGATGTGTACAGTTTCGGAGTAGTCTTGCTAGAACTCCTTACAGGAAGGAGAGCAATGGAGAAGACAAGACCAAAGACAGAGCAAAACCTTGTGGATTGGTCAAAGCCGTACTTAAGGAGCAGTAGAAGGTTGAGGTACATAATGGATCCAAGGCTTTTAGGGCAATACTCTGTGAAGGGTGCAAAGGAAATGGCTGTTTTGGCATTGCATTGTGTAAGCATGAATCCTAAAGACAGGCCAAGAATGGCAACAGTTGTTGACACTCTTGAGGGCCTACAACAGTTCAAGGACATGGCGGTTACTAGCGGACACTGGCCGGCGGCGAGTAAGTCCACTAGAAATAGTAATAATGGAGCTTCCAAGAATGTGAAGGGCAGAGGTGGTGCTAACCAAAAGAAACCCTCTCCTATAGTCCCAACCAAAAAGACTTGA 1260 0.4532 MKQPSSWRPFTTNCCSTEDQTIFTGFSKCKPSRSDLSKDVAPLPSFRRLSFSELSRSSSIRINEELSLSFGPDLYDFELSELRAITQNFSSNFLLGEGGFGTVHKGYVDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEDRLLVYEFMPRGSLENHLFRRLTSLPWGTRLKIAIGAAKGLSFLHGADKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQNLVDWSKPYLRSSRRLRYIMDPRLLGQYSVKGAKEMAVLALHCVSMNPKDRPRMATVVDTLEGLQQFKDMAVTSGHWPAASKSTRNSNNGASKNVKGRGGANQKKPSPIVPTKKT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00214 419 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 28 402 - -
Aip05g00214 419 MobiDBLite consensus disorder prediction 381 400 - -
Aip05g00214 419 Gene3D Phosphorylase Kinase; domain 1 52 171 - -
Aip05g00214 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Aip05g00214 419 Gene3D Transferase(Phosphotransferase) domain 1 172 383 - -
Aip05g00214 419 ProSitePatterns Protein kinases ATP-binding region signature. 95 124 IPR017441 GO:0005524
Aip05g00214 419 ProSiteProfiles Protein kinase domain profile. 89 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00214 419 CDD STKc_IRAK 95 368 - -
Aip05g00214 419 PANTHER OS01G0588500 PROTEIN-RELATED 28 402 - -
Aip05g00214 419 SUPERFAMILY Protein kinase-like (PK-like) 69 366 IPR011009 -
Aip05g00214 419 MobiDBLite consensus disorder prediction 379 419 - -
Aip05g00214 419 Pfam Protein tyrosine and serine/threonine kinase 95 365 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00214 Aip-Chr5 2282047 2287765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00214 77 381 Glycoside Hydrolase AT3G07070 51.456 8.11e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g00214 PK_Tyr_Ser-Thr 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00214 - - gmx:100814241 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00214 05 2282047 2287765 Aip05g00214 05 2282047 2287765 ECH