Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00199 ATGTCTCTTCTCAGCAGATTCTTCTACAAGCGTCCCCCTGATGGATTACTCGAATTCATCGACCGAGTCTACGTTTTCGATTCGTGTTTCTCCACCGAAGTGTTGCCCGAAGGAATGTACCAGCTGCACCTCCACGAGATCATCACGGAGCTCCATGAGGAGTTTCCAGAATCTTCTTTCCTTGCATTCAACTTCCGCGACGGCGAGAGGCGCAGCCAATTCGCTGAATTTCTCACAGAATACGATGTTGTCGTCATGGATTACCCAAAGCAGTACGAGGGTGTTCCAATTTTGCCCCTTTCTCTTGTTCAGCACTTTCTTAGAGTCTGTGATAGTTGGTTAAACTTAGGGAACCATCAAAATGTGATTTTGTTTCACTGTGAAAGAGGGGGCTGGCCCCTACTTGCATTTCTACTAGCTAGTTTACTTGTCTTTAGGAAAGTTCATAGTGGTGAAAAAAGGGCGCTTGAGATGGTTCATAGGGAGGCACCAAAGGGTTTGTTGCAGCTTTTGTCGCCTTTGAACCCTTTGCCCTCTCAGCTTCGATACATTCAGTATGTGGCGAGGCGGAATATTTCACCGGGGTGGCCGCCTCCGGAGCGCGCACTGTCGCTGGATTGTCTCATTTTGAGGGCAATTCCAGGCTTTGATTTGCAGAATGGGTGTAGGCCGATGATTAGGATATTTGGTAGGAACTTGCTCAGCAAGGATGGGCTTTCCACTCAGATGATATATTCAATGCATAAGAAGAAGAAGAGCTTGCGGCATTACCGCCAGGCAGACTGCGATGTGATTAAGATTGATATTCAGTGTTTAGTTCAAGGAGATGTGGTGTTAGAGTGCGTTCATTTGGATTTGGATCCAGAGAGGGAGGTGATGATGTTTCGTGTAATGTTTAATACAGCATTTATTCGGTCCAATATATTGATGCTGAATGCTGATAACTTGGACATTCTTTGGGATTCAAAGGATCGGTATCCAAAAGGCTTCAGGGCTGAGGTTTTGTTTGGAGAGGTAGAAAATGTAAGTCCTCAACGGGCTCCCACAACCATGCTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCGTTTTCACGGGTTCAAGAACTGTTTAGTGGCGTAGATTGGGTTGATAGTGGTGATGCTGCTGCTGTCTGGCTTCTTAAACAATTAACTGTCCTAAATGATGTCAAAGAGTTTTCAAGATTGCAAGGAAAAGGAAGTTGGTATTCATCGCCTGCTGACTCCGACGAGGAAAATAATGAATCAAGCACTGCTGATAGTTCGGATGAGGCCTTTGATGTTCCCAGGTTGTCTTCTGATACTCCAAAATTATTGACACCTGACATCCCTGATTCAATCCATTTAGCTTTTGAGAATCATGGTGGTAATCATGAAAATCGCGATTCAGCAACACCTGATCAGTCATTGACAGATAATGGGCCCTCAATTTGTCATGTTCCAAGCAATGAATATTCTCCTTGTTCATCTCCATCATCACCGTTATCAGTTCCTGCTACACAACCTTTGGTTCCAACTCCAGCACATGCCCCTCATCCTCCACCTCCACCTCCACCAATGTCTAGTGAACATGATCCGGTAACTTCAGCCCCACCACCACCACCTCCTCCACCTACTCCTCCAGTACTTGCAAGAACAGGTTCAGCCCCACCTCCACCCCCTCCACCTCCTCCAATACCAGCTAGAACAGGTTCTGCTCCACCAACTCCACCTCCACCTCCTCCAATACCTGCAAGAACAGGTTCAGCACCACCACCTCCACCTCCAATACCTGCAAAAGCAGGTTCAGCACCACCACCTCCACCTCCACCACCTCCACTACCTGCAAGAGTAGGTTCTGCCCCACCACCTCAACCTCCACCTCCTCCAGCACCAATAAGAACAGGTTCATCCCCATCGCCTCCGCCTCCACCTCCTCCACTGCCTACAAGAACAGGTTCTGCCCCACCACCTCCACCACCTCTACCACCTGTAAGAGCAAGTACTGTCCCACCTGCTCCACCTCCTCCTCCTCCTCCTTCAGCACCTACACCTAGACGAGCAGGTTCAACCCCACCAGCTCCTCCTCCACCTCCACCACCTCCAGGACGAGCAAGTTCAACTCCACCACCTGCCCCTCCCCCTCCGCCAGGACCTGTGCGAACAAGTTTAACATCAGCCCCACCACCGCCACCTCCACCCCCTCCAGGGTCTGTACGAAAAGGTCCTGGTCCACCACCTCCACCTCCACCTCCAGGTGTTCGAACAGTTTCAGCCCCACCAGCTGCACCAAAGCCTCCAAATGCTCCTCCTCCCCCAGTTGGTCGTAGTGGAACACCTATACCTCCTCCACCTCCTGCAGGCAGGGCCTCTAGTGTGCCACCACCACCTGGCAAAGGTTCTTTAGCACCAGCAAGTCTTGGAAGAGGCCGAGGTACTGGTGCAACTGTTAATGCACCTAAGAAAACTATGTTGAAGCCCCTTCATTGGGTGAAAGTTGCCCGAGCAGCACAAGGGAGTTTATGGGCTGATTCACAAAAGCAAGATAATGAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTGCTTCTGATGGGAGCAATGCTAAAGTTGGAGGTCGGCGCGGTTCTAATATCAACAAACCCGAGAAAGTACAACTGATTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAATCAAAATTCCTTTGCCAGATATGCTGAATGCTGTTCTAGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACCAAGGAAGAGATGGAGATGTTGAAGAATTATAAAGGGGACAAGGATATGCTTGGAAAATGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTCAAAATCAACTTTTCTTCTCAGGTGAATGATTTGAGGAAAAATTTGAATACAATCAACAATGCTGCTAAAGAGGTGAAAGAATCTGTGAAATTACGCCAGATAATGCAGACTATTCTTACCTTGGGCAATGCCCTGAATCAGGGAACAGCAAGGGGATCAGCAGTTGGATTCAAATTGGATAGCCTTCTCAAGTTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTGATGCATTATTTGTGCAAGCTTCTTGCTGAGAAAATGCCAGAATTGTTAGATTTTGACAAAGATCTTGTCCATTTGGAAGCAGCTTCAAAGATCCAACTGAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAGGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTGCCATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATACTGCTGAAGCCGACGTGAGGTCTCTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCTTTTGAGCAAGTTACACAAATCCTTGTTGTATTCATGAAGATGTTTAACAAGTCAAGAGAAGAGAATGAGAGGCTGGCAGAAGCTGAAAAGAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGGCAGCAGCAAATAACACAAACTCCAAAAAAGAAATGGTTAGATAG 3693 0.4668 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEVLPEGMYQLHLHEIITELHEEFPESSFLAFNFRDGERRSQFAEFLTEYDVVVMDYPKQYEGVPILPLSLVQHFLRVCDSWLNLGNHQNVILFHCERGGWPLLAFLLASLLVFRKVHSGEKRALEMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNISPGWPPPERALSLDCLILRAIPGFDLQNGCRPMIRIFGRNLLSKDGLSTQMIYSMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNADNLDILWDSKDRYPKGFRAEVLFGEVENVSPQRAPTTMLNGEEKGGLPIEAFSRVQELFSGVDWVDSGDAAAVWLLKQLTVLNDVKEFSRLQGKGSWYSSPADSDEENNESSTADSSDEAFDVPRLSSDTPKLLTPDIPDSIHLAFENHGGNHENRDSATPDQSLTDNGPSICHVPSNEYSPCSSPSSPLSVPATQPLVPTPAHAPHPPPPPPPMSSEHDPVTSAPPPPPPPPTPPVLARTGSAPPPPPPPPPIPARTGSAPPTPPPPPPIPARTGSAPPPPPPIPAKAGSAPPPPPPPPPLPARVGSAPPPQPPPPPAPIRTGSSPSPPPPPPPLPTRTGSAPPPPPPLPPVRASTVPPAPPPPPPPSAPTPRRAGSTPPAPPPPPPPPGRASSTPPPAPPPPPGPVRTSLTSAPPPPPPPPPGSVRKGPGPPPPPPPPGVRTVSAPPAAPKPPNAPPPPVGRSGTPIPPPPPAGRASSVPPPPGKGSLAPASLGRGRGTGATVNAPKKTMLKPLHWVKVARAAQGSLWADSQKQDNESRAPEIDISELESLFSAASASDGSNAKVGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYKGDKDMLGKCEQFFMELMKVPRVESKLRVFAFKINFSSQVNDLRKNLNTINNAAKEVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISTGFRKVLKNFLDTAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFMKMFNKSREENERLAEAEKKKLEKEAMKEKAAANNTNSKKEMVR 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00199 1230 SUPERFAMILY Formin homology 2 domain (FH2 domain) 829 1210 - -
Aip05g00199 1230 SMART it6_source 436 1228 IPR015425 -
Aip05g00199 1230 Coils Coil 1097 1124 - -
Aip05g00199 1230 Coils Coil 995 1015 - -
Aip05g00199 1230 MobiDBLite consensus disorder prediction 1197 1230 - -
Aip05g00199 1230 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Aip05g00199 1230 Pfam Formin Homology 2 Domain 821 1191 IPR015425 -
Aip05g00199 1230 MobiDBLite consensus disorder prediction 408 822 - -
Aip05g00199 1230 MobiDBLite consensus disorder prediction 1197 1216 - -
Aip05g00199 1230 ProSiteProfiles Formin homology-2 (FH2) domain profile. 816 1216 IPR015425 -
Aip05g00199 1230 PANTHER FORMIN-J 1 1225 - -
Aip05g00199 1230 Gene3D - 197 342 - -
Aip05g00199 1230 Coils Coil 1191 1225 - -
Aip05g00199 1230 MobiDBLite consensus disorder prediction 470 505 - -
Aip05g00199 1230 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Aip05g00199 1230 Gene3D Formin, FH2 domain 816 1201 IPR042201 -
Aip05g00199 1230 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Aip05g00199 1230 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Aip05g00199 1230 MobiDBLite consensus disorder prediction 506 802 - -
Aip05g00199 1230 SMART PTEN_C2_2 198 338 IPR014020 -
Aip05g00199 1230 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00199 Aip-Chr5 2141385 2149345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00199 1 435 FH2 protein (formin) Gene Family AT1G31810 77.931 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00199 - - adu:107487096 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00199 05 2141385 2149345 Aip05g00199 05 2141385 2149345 ECH