Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00198 ATGGACTACGATTCAGATAACCCATCGCAAGATGGGAGGGATGAAGATGATGAAGAAGAATATGAGGAGTCTGGCAAGGATAGTGGTTTTTTAGCCCTCATGTTTGGAAATTTCGATAATTCCGGTGGTCTTGATGCTGATTACTTTGACGAGGATGCAAAGGAGCATATTCATGCATTGGCCGGAAAGTTGGATTCATCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCACCTGATGTTGTTGAACAAGACTCTATTGAAAAGGCTGAAGATGCAGTTGATTATGAAGATATTGATGAGGAGTACGATGGCCCAGAGACTGAAGCTGCAAATGAAGAGGACTATTTACTACCAAAAAAGGAATTTTTCGCTGCTGAAGCCTCCCTGGAAGCTCTAGGGTCTAGAACTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGACAAGGAACAAGATGGAGTTGATGATTCAAAAGCTGTCTCATTGGCTGGGGAGCAGGAAAAGAGTGTTGTAGATGCATCTAAAGAAGACAAAGACAGTGCGCTTGAACGTGATGTACAAGTTGGGTTGCACCAGACTGAAGAATTGGCCATCAAGGTAAAGACACTTGAGGAAGGGCCTGAAGTTCTGAAAAGGTCTACGCCGTTGCCAGTTTTGTATGTGGAAGATGGGATGGAAATTTTACGCTTCTCTGAAATCTTTGGTATTCATGAACCTCTGAGGAAAGGAGAAAGGAGAGAGCATCGGCATTCTGTTACACACGATAGATACAAATCATTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGCATTCCTCAAGGGATTCTCTAGTCTTTCACTGACCAAACAGGCTTGTGTAGTCCATAATGATGCATCAGAAAGTAATGATGTTGATTTGGAATTTCCAAAATTTGGATTTCTTCATGGGGATGCCTCGACACCTACGAAAGATGATCGACAACAAAAGGACTCTTGTCTTAGTGCTGAACCAATGAAAGGCGATTTCACGAATGAGCTTCCATGGAAAGATACTTATGTCTTGTCAGCCAATTTTTATCCTCTTGATCAGCAAGATTGGGAAGATGAAATCATTTGGGGCAATTCTCCTGTTGTAAGTGACACTAATTTTGAGAGCTGTGAAATTTCGGGACCAGAGTTGGGAGCCTCTGGTGGTAGTGAAATAGAAATTGAAAGTGGGATACAGAATATACAGTTGGAGCCCCAGAAAATAATGGAGGAGAAAAAAAGTAATGTTTTCATGTGCAGCTCTCCTTTATCATTGGAACCATTTGGCTCAAGGGACTCTTCTGATGCTAAAACTGATTTATTATCTAAAAATCTATTTCATCCCCAGCTTTTGAGGTTAGAATCCAGATCAGAGATGGATGACACTGGTTATGCAGATGGAAGAGGGGAGTACACATCTGAAAAGCATAATGAGCTTGGCCATGTAAAGCGTTTTACCAAGGTGATGTCTCAAAATAGAGACCTGGCTGAGGGGTCTTGGTTAGACAATATTATATGGGAGTTCAATAAACCTTCTGTGAAACCAAAGCTTATCTTTGATCTTGAAGATGACCAAATGCACTTCGAAGTTTTGGATAACAAGAATAGTAGCCATCTTCACCTTCATGCAGGGGCTATGATTTTGACTCGTTCCCTAAAATCAAGCAGTGGGGATTCTGAGCTACCAGTACAGGGAGGTCAATATGGATGGCGATATGTTGCTAATGATAAACATTATTCAAACAGGAAAACTTCTCAGCAACTGAAGTCAAATTCTAAGAAACGCTCAGCGCATGGTGTCAAAATTTTCCACTCCCAACCTGCACTGAAGCTGCAGACAATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGTCCCAAAGCATTATGGTATCCCCATGATAGTGAGGTTGTTGTCAGAGAACAGAGAAAACTGTCAACACAGGGACCCATGAAAATTATTATGAAGAGCTTGGGTGGCAAGGGGACAAAACTACATGTTGATGCTGAAGAAACTCTAGCTTCTGTTAAAGCAAAAGCTGCTAAAAAGCTAGATTTCAAGGGATCAGAAAACGTGAAAACATTTTATTTGGGGAGGGAGCTTGAGGATCAGAAATCACTTGCTGCACAGAACGTTCAACCAAATTCATTGTTACACCTTGTACGGACAAAGATTCACTTGTGGTCAAGGGCACAAAGGGTTCCTGGTGAGAATAAGTCACTGCGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCCGTGAAAGATGGCCATGTTTTTCTGATGGAGTATTGTGAGGAAAGGCCTTTACTTTTGGGCAATGCTGGAATGGGTGCAAGGCTTTGTACGTACTATCAAAAGTGTTCTCCAGATGATCAATCTGGCTCTTTATTACGCAACACTGATAATAGCTTGGGGCACATTATATCTCTCGATCCAGCTGATAAATCTCCGTTCCTTGGGGACTTGAAACCTGGCTGCAGTCAGTCCTCACTGGAGACAAATATGTATAGAGCACCTATATTTCCTCATAAAGTTCCATTAACTGACTACCTGCTGGTACGCTCACCAAAGGGAAAGCTATCGCTAAGGCGCATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTGATGGAGGTGTTATCACCTGGAAGTAAGAATCTTCAGACTTACATGATGAACAGGCTATTAGTACACATGTGCCGTGAATTCCAAGTGGCAGAGAAGGGGCACTTCCTCCCATGCGTCCGTATTGATGAGCTCCTGTCACAATTTCCTTACCTATCAGAAGCCTCTTTCCGTAAAAGGATTAAGGAATATGCCACTTTACAGAGGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCTGAGGACGAATTAAGAAAAATGGTGACCCCAGAACTTGTTTGTGCTTATGAAAGCATGCAAGCTGGCCTCTACCGTCTAAAACATCTAGGCATAACCGAAACACACCCTACTAATATTTCGTCTGCAATGAGTCGGCTTCCCGATGAAGCGATTGCACTGGCTGCTGCATCACATATTGAAAGGGAACTGCAGATTACTCCTTGGAACTTGAGTAGCAACTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATCACTGGTGTCGGGGATCCATCTGGCCGTGGCTTGGGATTTAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAAAAGAAAGCTGCTGCTGGCCGGGGTGGTTCCACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGGGAGGTGCTGCTTAAATTCAATGTTGCTGAGGAAGTCATTGCAAAACAAACAAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAGGCTGCATCTGGGGTTAAGGTCGATCCAACTACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCTTTTCTTCAGTTACAGCAACAGACCAGAGAGAAGTGCCAAGAGATCTGGGATCGACAACTTCAGAGTCTTTCAGCTGTAAATGGTGATGAAAATGAGAGTGATTCAGAAGAGAACAGTGATCTAGATTCTTTTGCTGGTGATCTTGAAAATTTACTTGATGCTGAGGAGTTTGAAGAGGGAGAAGAGGGTACCAATGACTTGAAACGTGATAAGGGAGATGGTGTTAAGGGTCTCAAAATGAGAAGACACCCAACCTCAGCCCAAGCTAAGGAGGAAAAAGAAGATGAAGAGGCTGAGGCTGCCGAATTATGCAGGTTGCTTATGGATGATGATGAAGCTGACAGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGAAGAAGCTAGACTGGTACCAAAGCCGCCACCAAAATTCATCATCTATGACAGTACTGAACAAAATAAGCAAGTAACAAATACTTCACAACTAGATGGAACCATTCATTTGAAAGATGATGCAATTACAGATCTCAGGGAGGAGGAAACTTTTCCTGCTAAAAAAGCGAAGTCAGTGAAGGTCACAAAAGCAAAGAAGAATGAAATTGCACCTATTAGTCTACCTAATAAAAAACTCAAACTAAATATAGGAGAAGGAGCAATCAAGGTATTTAAGGAGAAGAAACCATCCAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGGACCAACAAGAACTGTCCAAAATATGGTGAAGATCTAGAAGCACAGATTGAATCTACAGACATTGAAAAACCATCTGGAAAGTCTATCATTTTGGATCCCTCTAATCAGTCCCAGCAGAAAAGCCTCACGAAGAAGTTGGTGCCTAAAACTGCACCCAAAACCCCTTCAGTTGACAATTCCACAAAATTGAAGTTCATATGCATCTCCACTGAGAAGTCTTCTGATAAACCTGCTTTAGAAAACCTGCAGAGTTCTGAGAAGCCAGTCACATCTGATTCTGAAACTGTTAGGTCTGCTAAGGTTAATAGAATAATTTTTCCTAAAAAAGTGAAGCCAGATGATACACAGGCTGAATCTGTAAGACGTCCTATCGTTATTCGGCCTCCTACTGATTCTGCTAGAGGTCAGGTTGATTCTCCCAAGGTCCCAATTAAATTTCGGCCACCTACAGATATAGAGAGGGAGAGACATCATCAAAAGCTTGTTATTAAACCTGCAAAGGAGATTGTTGATGTGGACCTTGACAGTCCTTATGGAAACAAACGACTAGAACACAGAAAAACCAAGAGAATTGTTGAACTGGCCAATTTTGAGAAACAAAGAAAGCCAGAGCCCATGTATCCAACTGAAGGTTTGACAAAATGGCAAGCTAAAGAGAGGAGATGGTGGGAAGAGCAAGAGAAACGAAGAAACGAAGCGAGACTCAAAGAAGAAAGGGCTAGAAGACATCACAAAGAAGAAATTAGGATGTTCAGAGAGCAAGAGGAGAGGTTAGACGAGATAAAAAGATTCGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAGGAACGGCAAAAGGCGAAGAAGAAAAAGAAGAAGAAAAAGCCCGAATTTACAGACGACTATTTAGATGACCACAGAGCTAGAAGATATGATAAGAGGATGCTAGACAGAGACAAGAGCACGAAGAGGAGATCCATCGAGTTAGGAAAACGTGGCGCAGACTTGATGCCGCCAACAAAACGGCGAAGAGGGGGAGGGGGAGAGGTTGGTTTAGCAAACATATTGGAGAGCATTGTGGAAGCCATTAAAGATAGGTATGATCTGTCATATCTTTTTCTGAAACCGGTTTCCAAGAAAGAGGCTCCTGATTACCTGGACATTATAGAGAGGCCTATGGATCTTGCTCGAATCCGGGAGAGGGTTCGGAATATGGAGTACAAGAGCAGAGAGGATTTCAGACACGATGTTTGGCAAATAACTTATAATGCTCACAAGTATAACGATGGGCGAAATCCTGGGATTCCACCCATCGCAGATATGCTTCTGGAATATTGTGATTATTTATTGAATGAGAATGATGATAACCTCACTGAAGCGGAAGCTGGTATTGAGAATAGAGATTTCTAA 5640 0.423 MDYDSDNPSQDGRDEDDEEEYEESGKDSGFLALMFGNFDNSGGLDADYFDEDAKEHIHALAGKLDSSLTDIDLSGKSPQTPPDVVEQDSIEKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFAAEASLEALGSRTSVFDDENYDEESDKEQDGVDDSKAVSLAGEQEKSVVDASKEDKDSALERDVQVGLHQTEELAIKVKTLEEGPEVLKRSTPLPVLYVEDGMEILRFSEIFGIHEPLRKGERREHRHSVTHDRYKSLDLSDDIVEEDEEAFLKGFSSLSLTKQACVVHNDASESNDVDLEFPKFGFLHGDASTPTKDDRQQKDSCLSAEPMKGDFTNELPWKDTYVLSANFYPLDQQDWEDEIIWGNSPVVSDTNFESCEISGPELGASGGSEIEIESGIQNIQLEPQKIMEEKKSNVFMCSSPLSLEPFGSRDSSDAKTDLLSKNLFHPQLLRLESRSEMDDTGYADGRGEYTSEKHNELGHVKRFTKVMSQNRDLAEGSWLDNIIWEFNKPSVKPKLIFDLEDDQMHFEVLDNKNSSHLHLHAGAMILTRSLKSSSGDSELPVQGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDSEVVVREQRKLSTQGPMKIIMKSLGGKGTKLHVDAEETLASVKAKAAKKLDFKGSENVKTFYLGRELEDQKSLAAQNVQPNSLLHLVRTKIHLWSRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNAGMGARLCTYYQKCSPDDQSGSLLRNTDNSLGHIISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSPKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQVAEKGHFLPCVRIDELLSQFPYLSEASFRKRIKEYATLQRGTNGQSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVAEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQLQSLSAVNGDENESDSEENSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRHPTSAQAKEEKEDEEAEAAELCRLLMDDDEADRKKKKKARVVEEARLVPKPPPKFIIYDSTEQNKQVTNTSQLDGTIHLKDDAITDLREEETFPAKKAKSVKVTKAKKNEIAPISLPNKKLKLNIGEGAIKVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQIESTDIEKPSGKSIILDPSNQSQQKSLTKKLVPKTAPKTPSVDNSTKLKFICISTEKSSDKPALENLQSSEKPVTSDSETVRSAKVNRIIFPKKVKPDDTQAESVRRPIVIRPPTDSARGQVDSPKVPIKFRPPTDIERERHHQKLVIKPAKEIVDVDLDSPYGNKRLEHRKTKRIVELANFEKQRKPEPMYPTEGLTKWQAKERRWWEEQEKRRNEARLKEERARRHHKEEIRMFREQEERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPEFTDDYLDDHRARRYDKRMLDRDKSTKRRSIELGKRGADLMPPTKRRRGGGGEVGLANILESIVEAIKDRYDLSYLFLKPVSKKEAPDYLDIIERPMDLARIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPIADMLLEYCDYLLNENDDNLTEAEAGIENRDF 1879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00198 1879 Pfam Bromodomain 1767 1841 IPR001487 GO:0005515
Aip05g00198 1879 SUPERFAMILY Ubiquitin-like 658 735 IPR029071 -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1687 1756 - -
Aip05g00198 1879 SUPERFAMILY Bromodomain 1746 1870 IPR036427 GO:0005515
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1493 1512 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 142 184 - -
Aip05g00198 1879 ProSitePatterns Bromodomain signature. 1780 1837 IPR018359 -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1 28 - -
Aip05g00198 1879 Pfam Protein of unknown function (DUF3591) 584 1150 IPR022591 -
Aip05g00198 1879 Gene3D - 646 736 - -
Aip05g00198 1879 ProSiteProfiles Ubiquitin domain profile. 664 734 IPR000626 GO:0005515
Aip05g00198 1879 PRINTS Bromodomain signature 1778 1791 IPR001487 GO:0005515
Aip05g00198 1879 PRINTS Bromodomain signature 1792 1808 IPR001487 GO:0005515
Aip05g00198 1879 PRINTS Bromodomain signature 1808 1826 IPR001487 GO:0005515
Aip05g00198 1879 PRINTS Bromodomain signature 1826 1845 IPR001487 GO:0005515
Aip05g00198 1879 ProSiteProfiles Bromodomain profile. 1775 1845 IPR001487 GO:0005515
Aip05g00198 1879 PANTHER BNAA01G26290D PROTEIN 1387 1876 - -
Aip05g00198 1879 PANTHER BNAA01G26290D PROTEIN 15 1335 - -
Aip05g00198 1879 Pfam Ubiquitin family 668 736 IPR000626 GO:0005515
Aip05g00198 1879 Coils Coil 1671 1705 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1446 1462 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1440 1472 - -
Aip05g00198 1879 SMART bromo_6 1755 1865 IPR001487 GO:0005515
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1704 1749 - -
Aip05g00198 1879 Gene3D - 1677 1878 IPR036427 GO:0005515
Aip05g00198 1879 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1387 1876 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Aip05g00198 1879 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 15 1335 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Aip05g00198 1879 SMART ubq_7 664 736 IPR000626 GO:0005515
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1545 1564 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 69 120 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g00198 1879 Coils Coil 1266 1286 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1236 1277 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 1242 1277 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 93 114 - -
Aip05g00198 1879 MobiDBLite consensus disorder prediction 70 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00198 664 734 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 5.54e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00198 K03125 - gmx:100780733 2817.72