Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00197 ATGCAACAGTCAGATCCATTGCAGAAACCCAAAAAATATCGTTATGCTCTCCAAACTTCTCCTAAGTGGCTTGGTCCACAAATTGAAGTCATTAGGTATTCGACTAAATCAATTGAGAGGGAAATAAACTCTGTCGACGACAATCCTCTGATTGATGTCACTAGTAGCAAGGCTTTGAATGGTGGCAATTTTCAAGGCACCCCAATTGGATTTTCGATGGATAGTGCAAGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACCGAACTAGCATCTGAGGTTGCCAAGGCTGCTTATTGCTCTGAACATCAATATTTGGCAAACCCAATAACCAACCACGTGCAAAGTGCTGAGCAACATAACCAAGATGTGAATTCCTTGGGGTTAATTTCTGCTTGGAAAACCGTAGAATCTGTCGAGATATTGAAGCTAATGTGCTCCACGTATTTGGTTGCGCTTTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTGAAGAGCACAATCAAGGATACTATAAGCGGAGTTGCAAAGAAGACATTAAGCACGGATTTGTTTAGATCATGTGAGAGAGATTTGCTCAAAGTAGTTGATAGGGAATATGTATTCTCCTATATTGATGATCCCTTCAATGTTAGGTATCCATTGATGCCAAAATTAAAACAAATACTTTATGAGGAAGCACAAGCGAGTGCCATCAGCGGGAAGAAAAATGCGAGCGTAGTTTTTGAGGAAATTGGAGCTTTTGAGAATGAGTTGAAGAGTATGTTACCAAATAAGGTTGAAAGTGCAAGGGTGGCCTATGAGAATGGGAATCCAACAGTTCCAGATAGAATTGCAAAAAGCATATCATACCCAGTGTATAAGTTTGTTAAAAAGAAACTCGGAATAGGGTTGCTCACCGGGGAGAAAACTGCCTCACCAGTGCTCTTGCTGCCCCACAACAGAAAGTTGATTGCAGTTAGAATCACGAAAGCAATTCCTGGAAAGAAGCATGCAGCAAACCACGAAATCCGCCACCACCCTTGCGTTGTTCCCTTGATGGTCCTCCACAACTCGCACACTCACATATCCAGGAGGACAACCCCATCACGCTCGTTTCCTCCTGGCACGACGAATGAAGATGCATAA 1146 0.4232 MQQSDPLQKPKKYRYALQTSPKWLGPQIEVIRYSTKSIEREINSVDDNPLIDVTSSKALNGGNFQGTPIGFSMDSASLAVASIGKLIFAQFTELASEVAKAAYCSEHQYLANPITNHVQSAEQHNQDVNSLGLISAWKTVESVEILKLMCSTYLVALCQAIDLRHLEEILKSTIKDTISGVAKKTLSTDLFRSCERDLLKVVDREYVFSYIDDPFNVRYPLMPKLKQILYEEAQASAISGKKNASVVFEEIGAFENELKSMLPNKVESARVAYENGNPTVPDRIAKSISYPVYKFVKKKLGIGLLTGEKTASPVLLLPHNRKLIAVRITKAIPGKKHAANHEIRHHPCVVPLMVLHNSHTHISRRTTPSRSFPPGTTNEDA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00197 381 PANTHER HISTIDINE AMMONIA-LYASE 2 94 IPR001106 -
Aip05g00197 381 Gene3D Fumarase/aspartase (Central domain) 97 313 - -
Aip05g00197 381 Gene3D Fumarase/aspartase (Central domain) 2 95 - -
Aip05g00197 381 MobiDBLite consensus disorder prediction 361 381 - -
Aip05g00197 381 Gene3D - 167 282 IPR023144 -
Aip05g00197 381 PANTHER PHENYLALANINE AMMONIA-LYASE 2 94 - -
Aip05g00197 381 PANTHER PHENYLALANINE AMMONIA-LYASE 95 313 - -
Aip05g00197 381 PANTHER HISTIDINE AMMONIA-LYASE 95 313 IPR001106 -
Aip05g00197 381 SUPERFAMILY L-aspartase-like 5 313 IPR008948 GO:0003824
Aip05g00197 381 Pfam Aromatic amino acid lyase 13 96 IPR001106 -
Aip05g00197 381 Pfam Aromatic amino acid lyase 97 166 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00197 Aip-Chr5 2111202 2112429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00197 1 313 Monolignol Biosynthesis Gene Families AT2G37040 58.551 1.59e-141 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00197 K10775 - gmx:100787872 469.929