Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00183 ATGGTGGCAGCTACCTTGCAATTTTGGCGCTTCCCTTTAAATTCATGCTTCGACCCTCTCTCGTCTCCGATTTCTGACTCTGATCTAATGGCTGTGCAACTCACCGCATCGGCGATAACCACAATTTGCTCGAACCATTTCAGTTCGATTGAGAATCTGAAGCCGGTTTTGCAAGTAATCCACGTGAAGCTTTTCCCGTCGCAGGACAGGTACTGCTTGGTGCTCTCCGATGGCTCTCACTACCAGCAATCTATACTCGCCACCAAGAAGAACCACTTGCTCACTTCCGGCACCTTGCAGACTGGTTCCATCATCGTCCTCACTTTGTTCACCACCTCCGTTATCCAGAACAGCACTGTTATCATCATCGTTGATCTACATGTGATACTTAAGAAATGTAATCTAATTGGAACTCCTGTGTCAGCCAATTTCGTTGAATCTTATGCAAATCAAAACATGGATTTCTGCAATCATGAATCTCAGGCTTCAATAAGTCCCTTTCAAAATTCTTATGTTCATCAACCTCAGCCCATGCATCAACAGCCAATGAAAATGCCCGAGGCAAAGGAAAATTTCACACCATCAGTTTGCTTGGATATTCAAGCTGTCTGGAAGCGGTGTGAAACCATTGAAAAGGAAGTTCAATCATTAAAAGATAGTTTGTCCCTCATCAACAGGAAGGATTCAGAACAAAGAAAGCAGATAAAAGACCTTCGGAAGCAGAATGCAGAGTTGGCAGGCGAGAAAGAGCGACTCCTACAAGCGATTCAAGGAATTTTGTCGGAAAATCGAAGGATCTAA 801 0.4407 MVAATLQFWRFPLNSCFDPLSSPISDSDLMAVQLTASAITTICSNHFSSIENLKPVLQVIHVKLFPSQDRYCLVLSDGSHYQQSILATKKNHLLTSGTLQTGSIIVLTLFTTSVIQNSTVIIIVDLHVILKKCNLIGTPVSANFVESYANQNMDFCNHESQASISPFQNSYVHQPQPMHQQPMKMPEAKENFTPSVCLDIQAVWKRCETIEKEVQSLKDSLSLINRKDSEQRKQIKDLRKQNAELAGEKERLLQAIQGILSENRRI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00183 266 SUPERFAMILY Nucleic acid-binding proteins 30 137 IPR012340 -
Aip05g00183 266 Pfam Replication factor-A protein 1, N-terminal domain 34 129 IPR007199 GO:0003677|GO:0005634|GO:0006260
Aip05g00183 266 CDD RPA1N 38 129 IPR007199 GO:0003677|GO:0005634|GO:0006260
Aip05g00183 266 Coils Coil 207 255 - -
Aip05g00183 266 Gene3D - 32 143 IPR012340 -
Aip05g00183 266 PANTHER PROTEIN CYCLOPS 184 265 IPR040036 GO:0005634|GO:0036377|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00183 Aip-Chr5 2005748 2008044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00183 29 176 Core DNA Replication Machinery Family AT4G19130 33.333 6.74e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00183 - K07466 aip:107642403 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00183 05 2005748 2008044 Aip05g00183 05 2005748 2008044 ECH