Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00178 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAAGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCAGTGTGATAGGCAGCCCAACCATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATCAGTTCCCACAGCTTGCTGGTGTACATCTTTCGGCACTGATACCATCTGCGAGTGATGATGCAGTCAGCCTTATCAGGTCACTTTGCTCATGGGATCCCTGCAAGAGGCCTACAGCTGCAGAGGCCCTTCAACATCCCTTTTTCCAGACTTGTTTTTATGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCAAGAACTCCTCCATCTGCTGGAACAAGGGGAGCCCTTGATCAGCAAGGGGTTAGGAGATATTCTGGCATGTTGCCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGTAAGCTGGATATGGTGAATCAGAATGGAAGTAAGAATGAGAAGTCCATGAATACTGTTAAACAATCAAAATATCGACAGCCTGGAAAGGATAGCCCAACTTCTATGAACAAGGGTAGGAATGCGAAGGCAATTTCTGAAACAGCGGATAGGTTGACCAATATGAATGTTGGTAGTGGTACTCGAAGACATTCTATAGGACAACCCCGCCCTCCTCCAATGAAGGCTGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGAGCTGCACAGCCGATCCCCACCGGAAGAACTTTCAGTCGAAAGGTTGCTGGATGA 1362 0.4391 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICSVIGSPTIESWADGLKLARDINYQFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAEALQHPFFQTCFYVPPSLRTRAVSRTPPSAGTRGALDQQGVRRYSGMLPNSKLTNNFSSPKLHPPLASGVQRKLDMVNQNGSKNEKSMNTVKQSKYRQPGKDSPTSMNKGRNAKAISETADRLTNMNVGSGTRRHSIGQPRPPPMKAGVNWISESGNFMLRAAQPIPTGRTFSRKVAG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00178 453 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Aip05g00178 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Aip05g00178 453 CDD STKc_MAK_like 4 283 - -
Aip05g00178 453 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Aip05g00178 453 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Aip05g00178 453 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00178 453 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00178 453 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00178 453 MobiDBLite consensus disorder prediction 354 388 - -
Aip05g00178 453 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 415 - -
Aip05g00178 453 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 415 - -
Aip05g00178 453 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00178 Aip-Chr5 1938291 1956534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00178 1 284 Core Cell Cycle Gene Families AT3G48750 38.699 2.19e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip05g00178 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00178 K08829 - gmx:100810150 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00178 05 1938291 1956534 Aip05g00178 05 1938291 1956534 ECH