Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00177 ATGTTTACATGCATAGCTTGTACAAAGCAAACGGCGGAAGAGAGGGAAGAAGAAAGCCGTGAAGGTGGCACGCCCAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGTTAAAGGACATGGCACTGAAGTTTTCAGGTGCATACAAGCAGTGCAAGCCATGCACAGGGTCAAGTACCTACAAGAAAGGACAGAGACCTTATCCTGATTTTGACACCATCTCAGAAGGGGTTCCATACCCTTACATGGGAGGTGCAAGCACAAGTTCAACCCCTGCTTGGGACTTCACTAGCTCCAATCATCCTGGTAGAACTGACCCAAGATTCATGAGAGGATTTGGTGGGGATCAGACCCCTAGAGCTCGCGATTCGGCCTCGGTTTGTGATGTGGTGTTGGAGGATGAGGGTGAAGCCAAGGAGTGGATGGCACAAGTGGAGCCAGGGGTTCACATCACCTTTGTTTCTCTTCCTAATGGTGGAAATGACCTCAAAAGAATTCGCTTCAGCCGGGAGATGTTCAATAAATGGCAAGCACAAAAATGGTGGGGCGAGAATTATGACAGAATCATGGAACTTTACAATGTTCAACGATTCAATCGACAATCTCTTAACACTCCTCCAAGATCCGAGGATGAGCCAAGGGATTCTACATACTCAAGATTGACATCTGCGCGAGAAAGTCCTATGACCTCATCTTTAAACAGAGATTGGACAACACCAAGGCATCACTATAAACACTTGGAACAAGGTGGTTCCGGCCACCAGTTCCATGCAGCAGGGTCATCCATGGAAGCATCAAGGACTACAACCTCTTCTAGAGACGAGCCTTCGGTGAGCAATGCGAGCGAGATGGAGACAGAATGGGTAGAGCAGGATGAGCCTGGAGTTTACATCACAATCAGGCAGTTAGCCGATGGAACGAGGGAGCTTCGACGCGTGAGATTCAGCCGGGAAAGATTTGGGGAGGTAAATGCAAAGACATGGTGGGAGGAGAACAGAGATAGAATACAAGCTCAATACCTTTGA 1026 0.4834 MFTCIACTKQTAEEREEESREGGTPSTKEAVKSLTTQLKDMALKFSGAYKQCKPCTGSSTYKKGQRPYPDFDTISEGVPYPYMGGASTSSTPAWDFTSSNHPGRTDPRFMRGFGGDQTPRARDSASVCDVVLEDEGEAKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQSLNTPPRSEDEPRDSTYSRLTSARESPMTSSLNRDWTTPRHHYKHLEQGGSGHQFHAAGSSMEASRTTTSSRDEPSVSNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRDRIQAQYL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00177 341 MobiDBLite consensus disorder prediction 10 25 - -
Aip05g00177 341 MobiDBLite consensus disorder prediction 10 31 - -
Aip05g00177 341 Pfam Transcription factor BRX N-terminal domain 24 55 IPR027988 -
Aip05g00177 341 ProSiteProfiles BRX domain profile. 286 341 IPR013591 -
Aip05g00177 341 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 341 - -
Aip05g00177 341 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 341 IPR044532 -
Aip05g00177 341 MobiDBLite consensus disorder prediction 201 288 - -
Aip05g00177 341 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Aip05g00177 341 MobiDBLite consensus disorder prediction 255 285 - -
Aip05g00177 341 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Aip05g00177 341 Pfam Transcription factor regulating root and shoot growth via Pin3 285 340 IPR013591 -
Aip05g00177 341 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00177 Aip-Chr5 1930051 1935874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00177 1 341 Major Intrinsic Protein MIP AT1G31880 68.067 3.47e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00177 - - ccaj:109789470 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00177 05 1930051 1935874 Aip05g00177 05 1930051 1935874 ECH