Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00158 ATGGCTGCAAATGTGAACTTTGACATGCCACATAGCAGAATAAGCACCACGCTCATCACGTACCCTCATTGGTATTCACCAAAAAATGGAATTTACCGTAGCAAACACCTCTCTTTGGAGCTTCCCAAAGACCCTTTTACGGACCTTGTTTCCTTCGTCTTTTCCCACCGCCATAATGGGGTTTCAGCCCTTGTTGATTCCTCATCTGGGTCTTCAGTTTCTTACTCAAAGTTGCAACCTTTTGTCAAATCCATGGCCTATGGTCTTCACAAAATGGGTGTTTCACAAGGTGATGTGGTTCTGCTTTTGCTTCCAAATTCCATTTACTATCCCATTGTGTTCTTGGGTGTTCTGTGTTTAGGTGCTGTTGTTGCACCATTGAACCCTCTAAGTAGTGTCTCAGAGATACATAAACAAATCAAAGATTGTGGTGTGAGTTTTGCTTTCACTGTGCCTGAAAATTTCAAGAAACTAGAACCATTAGGAATTCCCGTTGTTGCTGTGCCAGAAAATGAGGAGGGTTTGAAGCTTGATTGTTTCTCATGTTTTAGTAACATGATTTCTGGTGAATTTGGTTTTTCGATGAGGCCAGTGATTCGACAGGAGGACACTGCTGCTATATTGTATTCTTCAGGGACGACTGGGGTGAGCAAAGGAGTTGTTCTAACACATAAGAACCTTATTTCTATGATTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGAATACTCTTGCTTGAACAATGTGTTTCTAGCTGTTCTTCCAATGTTCCATGTGTATGGTCTATCGCTTTTCGCTTTGGGGTTACTGTCTTTGGGTTCCACAGTCATTGTAATGAGGAAATTTGACATTGATGAGGTTATCAATGCAATTGACAAGTTTAAGGTTACACACTTCCCGGTAGTTCCGCCTATGTTGACAGCATTGACAAGGAGAGGAAAGGGTGTTAATGGAAGTAATTTGCAGAGTTTGATACAAGTCTCCAGCGGTGCAGCACCTTTGAATGAAAGTGTTATTGAAGACTTTGTGGAAACATTTCCTCATGTTGATTTTATACAGGGTTATGGAATGACCGAGTCGACTGCGGTAGGAACACGTGGCTTCAATACTGAAAAGTTGCACAACTATTTGTCAATAGGATTGTTAGCTCCAAACATGGAGGCAAGAGTTGTAGACTGGAGTAGCGGTGAATTCTTGCCTCCGGGAAGCAGTGGTGAGCTTTGGTTGAGAGGACCTGCAATCATGAAAGGGTACTTGAATAATGAGGAAGCGACGATGTCAACAATCGATAAAGATGGTTGGCTGCGTACTGGTGATGTTGTTTATTTTGATCAGGATGGGTATTTGTATATTTCAGACCGCTTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATCTCACATCCGGAAGTTGTTGATGTTGCAGTTACAGCTGCCATGGACGAAGCAGCCGGGGAGATTCCAGTAGCATTTGTGGTCAGGAAGGTCGGAAGCATGATTTCTGCAAAGCAAATAATAGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGATCTTCATTAAAAGGATACCAAGATCTCCAACTGGGAAGATCCTTCGGAGGCAGCTTAGGAATTTCTCCACTTCTAAACTCTAA 1683 0.4213 MAANVNFDMPHSRISTTLITYPHWYSPKNGIYRSKHLSLELPKDPFTDLVSFVFSHRHNGVSALVDSSSGSSVSYSKLQPFVKSMAYGLHKMGVSQGDVVLLLLPNSIYYPIVFLGVLCLGAVVAPLNPLSSVSEIHKQIKDCGVSFAFTVPENFKKLEPLGIPVVAVPENEEGLKLDCFSCFSNMISGEFGFSMRPVIRQEDTAAILYSSGTTGVSKGVVLTHKNLISMIELFVRFEASQYEYSCLNNVFLAVLPMFHVYGLSLFALGLLSLGSTVIVMRKFDIDEVINAIDKFKVTHFPVVPPMLTALTRRGKGVNGSNLQSLIQVSSGAAPLNESVIEDFVETFPHVDFIQGYGMTESTAVGTRGFNTEKLHNYLSIGLLAPNMEARVVDWSSGEFLPPGSSGELWLRGPAIMKGYLNNEEATMSTIDKDGWLRTGDVVYFDQDGYLYISDRLKDIIKYKGFQIAPADLEAVLISHPEVVDVAVTAAMDEAAGEIPVAFVVRKVGSMISAKQIIDYVAEQVAPYKKVRKVIFIKRIPRSPTGKILRRQLRNFSTSKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00158 560 ProSitePatterns Putative AMP-binding domain signature. 207 218 IPR020845 -
Aip05g00158 560 Gene3D - 458 558 IPR045851 -
Aip05g00158 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 559 - -
Aip05g00158 560 Gene3D - 30 457 IPR042099 -
Aip05g00158 560 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 17 559 - -
Aip05g00158 560 CDD 4CL 41 552 - -
Aip05g00158 560 Pfam AMP-binding enzyme 57 462 IPR000873 -
Aip05g00158 560 Pfam AMP-binding enzyme C-terminal domain 472 546 IPR025110 -
Aip05g00158 560 SUPERFAMILY Acetyl-CoA synthetase-like 58 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00158 Aip-Chr5 1794663 1798028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00158 1 560 Monolignol Biosynthesis Gene Families AT4G19010 59.503 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00158 K01904 - gmx:100804808 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00158 05 1794663 1798028 Aip05g00158 05 1794663 1798028 ECH