LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g00155	ATGCTCAAGCAAAGGGTTCATGGATTCCACCAAAGACAAGTAGTGTTCTACACAACAACCAACAACAAAAGAAGCAGCAACAAGAGAAGCGGAAACAACAATAATACCGGCCGCTATGTAATAACATGCGCGGCCGGAGACACGGTGGTGATTGGTCTTGCCGCAGACTCGGGCTGCGGCAAGAGTACCTTCATGAGAAGGCTAACAAGTGTGTTCGGGGGCGCCGCGGAGCCGCCCAAGGGCGGAAACCCGGACTCGAACACACTTATCAGTGACACAACCACCGTGATATGCTTGGATGATTACCATTCATTGGATAGAACTGGAAGAAAAGAGAAGGGTGTGACTGCACTTGATCCAAGAGCCAATGATTTTGACCTCATGTATGAACAAGTTAAGGCTCTTAAGGAAGGAATTGCAGTTGAGAAACCTATTTACAACCATGTCACTGGTCTCTTGGATCCACCAGAAGTCATCAAACCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATCACGCCCTTCTCTCAACCCAAACGCAATCAACTTTTCCAGTTCTCCTTTTTTCTCGAACTTTTTCGACTTGAAGCTCGTTGCTTTATCCCAAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGATGCCTATATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACTCAGCTGATCCCAGATGACAATGAAGGGAAGATTCTAAGAGTGAGGCTGATACAGAAAGAAGGGATTAAACACTTTAGCCCTGTTTATTTGTTTGATGATGGTTCCACCATTTCTTGGATTCCATGTGGAAGGAAGCTTACATGCTCTTACCCTGGCATCAAATTCTTCTATGGACCTGATACTTACTTTGGAAATGAGGTGTCAGTTGTAGAAATGGATGGTCAATTTGACAGATTAGATGAACTAATATACGTAGAGAGCCATCTAAGCAACCTGTCAACAAAGTTCTATGGAGAAGTGACTCAACAGATGTTGAAGCATGCTGACTTCCCTGGAAGCAACAATGGCACTGGTCTCTTCCAAACCATTGTTGGTCTCAAGATTAGAGACTTATATGAACAGATCATAACCTCCAAGGCTGAGACCCCTGTTGGAGCAGCTAAGGCTTAG	1191	0.4475	MLKQRVHGFHQRQVVFYTTTNNKRSSNKRSGNNNNTGRYVITCAAGDTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGIAVEKPIYNHVTGLLDPPEVIKPPKILVIEGLHPITPFSQPKRNQLFQFSFFLELFRLEARCFIPRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGIKHFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAETPVGAAKA	396

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g00155	396	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	49	321	IPR027417	-
	Aip05g00155	396	Pfam	Phosphoribulokinase / Uridine kinase family	50	250	IPR006083	GO:0005524\|GO:0016301
	Aip05g00155	396	CDD	PRK	50	341	-	-
	Aip05g00155	396	PRINTS	Phosphoribulokinase family signature	55	72	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Aip05g00155	396	PRINTS	Phosphoribulokinase family signature	219	242	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Aip05g00155	396	PRINTS	Phosphoribulokinase family signature	201	218	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Aip05g00155	396	PRINTS	Phosphoribulokinase family signature	164	182	IPR006082	GO:0005524\|GO:0005975\|GO:0008974
	Aip05g00155	396	Gene3D	-	46	281	IPR027417	-
	Aip05g00155	396	PANTHER	PHOSPHORIBULOKINASE	5	396	-	-
	Aip05g00155	396	PANTHER	URIDINE KINASE	5	396	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip05g00155	102	278	PRT Gene Family	AT3G27440	24.590	7.95e-08	52.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g00155	K00855		-	gmx:100777515	644.039

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip05g00155	05	1763688	1771446	Aip05g00155	05	1763688	1771446	ECH