Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00134 ATGGCGGCACCCACAAAACGAGACGAGCAAGAAGCTCTACGCCTCAAGTCCCTGGCGGACTCCAACTTCACTTCCTCCAGAGACCTCAACGCCGCCTTCAACTACGCCAAGCGCGCCCACCGCCTCGCCCCAAATCTTCCCGGCGTCACCGAGACCCTCGCCGCCCTCACCGTTCTCCGCGCCGCCGCCTCTAAGAACTCCCCTTTCCCTGACTGGTACGCCGTCCTCGGTGCTGAGCCCTTCGCCCCCGCCTCCGTCCTCCGCAAGCGCTACAAGCAGCTGGCGCTCCTGCTCCACCCCGACAAGAGCCCCCACGTGGCATCTGATGAGGCATTCAAGCTCGTCGCCGAGGCCTTCCGGTTGCTCTCCGACAGGGCATGGAAGAGGGACTACGATGTCAAGCTCAGGTTGAGGATTCTGGATGAGAAGGAGAAGGAGAAGGTTGGTGAAGAGGACATGGATACATTTTGGACTGCATGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGGAAGTACCTGGGACATAATCTGGTATGCCCCTCTTGCAGGAAGAGTTTTAAGGCTGTGGAGGTGGGTAGTGATGATGATGGGTCTGAAGAAGAGGAAAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGGACGGGGAGGAAGAAGAAGAGGTAGAGAGAGCTGAGAAGGGTATGATTGGGAAATTGAAATCAAAAGAGGTGGTGGATGATGATGAGAGATTGTGGGATTTTGTGTCGAGGAGAAAAGCCAAGAGTGTGAAAGGGAAAATGGGCGTTGAAAAAGATGGAGGCTTGTGGAGGAGCCAGGGTTTGAAGGGCGGAATTGAGGGTGGTGAAGTGAGAAATGAGGATTCTGAGAGCAAAGGAGAGGGTGTTGCGGGAAGCTTGAGAAGTGGGGATTTGAGAACGCAGACTAAAGGGAAAGTAGGTATTGAAAAAGGGGGAGGCTTGATGAAGAGCAGGTGTTTGACGGGTGGAGTTGAGAGTAATGAAGTGGGAAATAAGGTCTTGGAGAGTGAAAGAGAGGGTATTGGAGGAAGGTTGAGAAGTGGGGATTTGAGAAAGAGGAAGCATATGGTTGGGGAGGTGTTGGACAGTTCAAAACCCAAGAGGGTCAAAACTGGGGAGGAAATGATGACATTGGCTGAGTTTCAGTCTGAAGTAAAGCGAACAGCTCGGCAGAAGATGAAGTTGAAACTAAAAGAAAATGGAGAAGATCATGAAACAGAGAGGAGGAGCAAGCGGCGGGAAAGATTTGGTGAGTTGAAAAATAACAAGGATTTAGAGGCTGGGGAATGTAGGAGTATGAAGAAGAGCGTGAAGCCATTAGTCAAGGGGATGAAAGAGGACTCTCTGAAGAAAAAGGAAGCGAGACCTGAGAAGCACGGTGATTCTGGTGGAAGGGACTTGGAGACTATCACAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAACTCATAGAAGCTTTAGGAAAGGTCAAATGTGGGCTGTATATGATGATATTGATGGAATGCCAAGGCATTATGCCTTGATTGATGAAGTTTTTTCAGCAAACCCTTTTCAAGTGAGTATAAGTTGGTTTGATCTGCAAAACAATGGGGTTGAAAAGATTATTAGTTGTGAGAAAATGGGGTTTCACATGCCTTGTGGAAGATTTAAAGTTACCCAGAAGGCTTCCATAAATTCAGTAAATGTATTTTCTCATGTTGTGGACTGTGATCGAGCAGCACGCGAGGTCTACCAAGTTTATCCAAAGAAGGGCTCAGTATGGGCACTTTATGGTAAGGCAACTCTTGATGCAGATGAACAAAATTTTGCAGCCAAGGGTAAGAGATGCTATGACATTGTTGTATTCTTAACAAGTTACAGTGAAATCTCTGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACTGTATTTAAGAGACAAGAGAGGGGAAGTCATGCTATTAGATTTCTTGGAAAGGATGACCTGTGGTTAATTTCTCATCAGATTCCTGCTCGAAAATTATCTTGTAATGATACTCCTGAACTTTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCCTCGGATTTACTTACTATAGGTGGCATAGATAATTGA 2148 0.4763 MAAPTKRDEQEALRLKSLADSNFTSSRDLNAAFNYAKRAHRLAPNLPGVTETLAALTVLRAAASKNSPFPDWYAVLGAEPFAPASVLRKRYKQLALLLHPDKSPHVASDEAFKLVAEAFRLLSDRAWKRDYDVKLRLRILDEKEKEKVGEEDMDTFWTACSTCRLLHQFERKYLGHNLVCPSCRKSFKAVEVGSDDDGSEEEEKEEEEEEEEEKEKEDGEEEEEVERAEKGMIGKLKSKEVVDDDERLWDFVSRRKAKSVKGKMGVEKDGGLWRSQGLKGGIEGGEVRNEDSESKGEGVAGSLRSGDLRTQTKGKVGIEKGGGLMKSRCLTGGVESNEVGNKVLESEREGIGGRLRSGDLRKRKHMVGEVLDSSKPKRVKTGEEMMTLAEFQSEVKRTARQKMKLKLKENGEDHETERRSKRRERFGELKNNKDLEAGECRSMKKSVKPLVKGMKEDSLKKKEARPEKHGDSGGRDLETITVVDSDFYDFDKDRTHRSFRKGQMWAVYDDIDGMPRHYALIDEVFSANPFQVSISWFDLQNNGVEKIISCEKMGFHMPCGRFKVTQKASINSVNVFSHVVDCDRAAREVYQVYPKKGSVWALYGKATLDADEQNFAAKGKRCYDIVVFLTSYSEISGLSMAYLEKVDGYKTVFKRQERGSHAIRFLGKDDLWLISHQIPARKLSCNDTPELLKDCWELDPASLPSDLLTIGGIDN 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00134 715 MobiDBLite consensus disorder prediction 454 475 - -
Aip05g00134 715 Coils Coil 197 229 - -
Aip05g00134 715 MobiDBLite consensus disorder prediction 405 430 - -
Aip05g00134 715 MobiDBLite consensus disorder prediction 271 330 - -
Aip05g00134 715 Pfam DnaJ domain 71 132 IPR001623 -
Aip05g00134 715 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 8 711 - -
Aip05g00134 715 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
Aip05g00134 715 CDD DnaJ 71 124 IPR001623 -
Aip05g00134 715 Pfam Domain of unknown function (DUF3444) 479 684 IPR024593 -
Aip05g00134 715 PANTHER BNAC03G44070D PROTEIN 8 711 - -
Aip05g00134 715 MobiDBLite consensus disorder prediction 191 232 - -
Aip05g00134 715 MobiDBLite consensus disorder prediction 454 476 - -
Aip05g00134 715 Coils Coil 388 408 - -
Aip05g00134 715 Gene3D DnaJ domain 58 161 IPR036869 -
Aip05g00134 715 SMART dnaj_3 70 127 IPR001623 -
Aip05g00134 715 MobiDBLite consensus disorder prediction 195 225 - -
Aip05g00134 715 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Aip05g00134 715 PRINTS DnaJ domain signature 73 91 IPR001623 -
Aip05g00134 715 PRINTS DnaJ domain signature 91 106 IPR001623 -
Aip05g00134 715 PRINTS DnaJ domain signature 107 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00134 Aip-Chr5 1562249 1564689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00134 8 192 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.010 3.47e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00134 - - aip:107642362 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00134 05 1562249 1564689 Aip05g00134 05 1562249 1564689 ECH
Aip10g00089 10 836602 840192 Aip05g00134 05 1562249 1564689 PCT