Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00121 ATGGAGTTGTTTCCAGCACAACCAGACTTGTCCTTGCAAATCAGCCCTCCAACAGGCAACGGCACCGCCAAACAACAAGAAGTTGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCTTCTAGAACCTCCTTCTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCTTCACTCCCCAAACCCACATCATACTTCGACCTCTCCCTCTCCAACCCAAGGCCTTCTCCCTCATCACACTACTTCAATAACACCGCCACCACCACCCCCACCAATAATCATAATCTCTTATTTCAATCGCTTCAGTACTACCACCACCACCACCACCATCCACTGTTACAGCCGCAGCCACAGTGGCAGCCGCACACCCTCAGCCAGGAGCTCGGCTTTCTTAGACCAATTAGAGGGATCCCGGTGTACCAGAACCCACCTTCTTTGCCATTCCCGCAGCACCACCATCACCACCATCATCTTCTAGAACCTTCGTCTCCTCCCACCACCGCCAACGCCGGCGCTTCCACTCATCACTTTCAGTCTCAGGCTTTGATGCGGTCGAGATTCTTGTCGCGATTCCCCGCCAAACGGAGCATGAGAGCTCCAAGGATGCGCTGGACTACCACTCTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAACTAATGGATGTCAAGGATCTCACTCTAGCACATGTTAAGTCACATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCGGCTTCTTCAGGGCAATCTGATGTATATGATAATAGATCATCGGGTGATACATCTGAAGACATAATGTTTGACATAAACTCACCATCAACAAGGAGGTCTTCTGATCTATCCGTTAAGCAGGGAAGAACAGATAATAATAACAATAACAATCATCTTAATCAAGATAAAGAATATCGTGGCCTTTGGAGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTTGATTCTGTTGGGAACAACGTGCATTCCCTTGAGAAGGAAATGGATCCAAAGTGTGTAAGCTATGAGAGAATATCAGATGGAAGCTCATCTTCAAACGTGTCAGCATCAACAAGCCCCAAGAAACCTAATTTGGATTTGGAATTCACATTGGGACAACCACTTTGA 1173 0.4749 MELFPAQPDLSLQISPPTGNGTAKQQEVDLGFWKRALDSSRTSFSSSSSPSPSSSSLPKPTSYFDLSLSNPRPSPSSHYFNNTATTTPTNNHNLLFQSLQYYHHHHHHPLLQPQPQWQPHTLSQELGFLRPIRGIPVYQNPPSLPFPQHHHHHHHLLEPSSPPTTANAGASTHHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNRSSGDTSEDIMFDINSPSTRRSSDLSVKQGRTDNNNNNNHLNQDKEYRGLWSNSSREAWLHGKPKLDSVGNNVHSLEKEMDPKCVSYERISDGSSSSNVSASTSPKKPNLDLEFTLGQPL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00121 390 Gene3D - 197 254 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 160 174 - -
Aip05g00121 390 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 389 - -
Aip05g00121 390 SUPERFAMILY Homeodomain-like 195 251 IPR009057 -
Aip05g00121 390 Pfam Myb-like DNA-binding domain 199 250 IPR001005 -
Aip05g00121 390 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Aip05g00121 390 MobiDBLite consensus disorder prediction 38 86 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 11 25 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 359 379 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 1 86 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 144 174 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 256 316 - -
Aip05g00121 390 MobiDBLite consensus disorder prediction 358 390 - -
Aip05g00121 390 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 389 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00121 Aip-Chr5 1392079 1397369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00121 116 389 G2-like Transcription Factor Family AT4G17695 41.638 1.72e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip05g00121 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00121 - - aprc:113868756 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00121 05 1392079 1397369 Aip05g00121 05 1392079 1397369 ECH