Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00119 ATGGTGGAAGGGAGAGTGCGTTTATCTAAGGAAGCTAGAAATGGGTTAGAAATTTTGAAGCGTAAAAGGCTTCAGCGAGCAAAGTCTGTCACTTCAACTGGCACAAGTGTAGCAAACATGATGAACAGAAGTGGAGGAGATGCTCTTAGAGGATTGGCTTCATGTGGTGTGGGATTGCATGGTAATGCAGATGCCTTTTCTAAGCGTAAGGTGGATAAGTTTGACACAAGTAATCTAGATTGGATTGATAAAATTCCAGAGTGTCCTGTGTATTCTCCAACAAAAGATGAATTTGAGGATCCTTTGGTTTATTTGCAAAAGATAGCTCCTGAAGCTTCTAAATATGGTATATGCAAGATTATTTCACCTTTGAGTGCTTCTGTTCCTGCTGGGGTTGTTTTAATGAAGGAGAAAGTAGGCTTCAAGTTTACAACTAGAGTGCAGCCCCTACGCCTTGCTGAATGGGATACTGAGGACAAAGTGACCTTTTTCATGAGTGGAAGAAATTATACATTTAGGGATTTTGAGAAAACGGCAAACAAGGTTTTTACTAGAAGATATTGCAGTGCTGGATGTCTTCCTGCCTCCTACTTGGAGAAAGAGTTCTGGCAAGAAATTGGTTGTGGGAAGATGGAAACAGTTGAATATGCGTGTGATGTTGATGGCAGTGCCTTCTCATCTTCTCCTTCTGATCAGCTTGGTAGCAGCAAGTGGAACTTGAAGAAACTTTCTCGGTTGCCGAAATCTACTTTGCGGCTCTTGGAATCATCTATTCCAGGAGTAACCGAACCCATGTTGTACATTGGAATGTTGTTTAGTATGTTTGCTTGGCACGTTGAGGATCATTATTTGTACAGCATTAATTATCATCACTGTGGGGCATCAAAAACATGGTATGGTATTCCAGGTCATGCAGCATTGGACTTTGAAAGGGTGGTGAGAGAACATGTGTATACTAATGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTTGATGTTCTCTTGGGGAAAACAACACTATTTCCACCAAATATTTTGCTGGAACATGAAGTCCCCGTTTACAAGGCTGTTCAAAAGCCAGGAGAGTTTGTGATAACCTTCCCTAGGGCATACCATGCTGGATTCAGTCATGGTTTCAACTGCGGAGAAGCTGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCTAGCCGGAGATATGCACTGCTTAATAGGATTCCTTTGCTTCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTGTATGCATCCATGGAGCTTGAAGATTCAGACATCTCTATAGGCTTGCTATACCAGCATTCTATTAAGGTTTCTTTTGTTAATTTGATGCGTTTCCAGCATTGTGCCCGTTGGTTACTAATGAAATCAAGAGCATGTATAAGTGTCTCTTCTCATTCCCATGGCGCGATTCTCTGTAGCGTCTGCAAACGCGACTGTTATGTAGCTTTTGTTGACTGCAGCTGTCACCTGCATCCAGTATGCCTACGACATGATATTGAATCCCTTGACTTAACCTGTGGGAGCAAATACACACTTTTTGTGAGGGAGGATATTACAGATATGGAAGCTGCAGCAAAGTTGTTTGAGCAGGAAGATGGGATTCTTCCGCAAACCCAAAGTGACCAAAACATGTATTGCCATCCTTTGTCAAATATGCTTCGGAAAGCTAAGGCAAATGGATACACACCTTATTGTGAGCTGAAACTTGATTCTGTTGTTGAATTTTATACAACTCCAGAGCAGACAACAAATAATCAAGAATGTGGTACACAAAGTCAATTTGTTTTCGGACATGGCTTGGAGTATCGTATGCCAGAAGTGCCTGAGGCTGCAACCACTCTTTGTTCTCTTTCAGAACCTCTTGAATCCTCCTCTTCTCTAAAAAATGCTGAGGGGCATGGCAACTTGAAGCTACGAAGTAGTGCTTTTGAAGAGAATGGTGGTGAAAGAACATCGAACAATGCATGTGAATCTTCCCCATCCCCTGCTGAGTATCATGAAAGCTCATGTAAACCACAGCGAGATCTTCATAGATCTGACGTGAAGCCCTTTGTGGATAATAGGAGTGATGATTCTGATTCGGAGATGTTCAGGGTAAAGCGTCCTTCTTCACTGAAAGCAGAGAGGAGAAGTGCAAATGATGCTTTGACTCTGAAGCATTCTGAGCAGCAGGGACTCAAACGATTGAAGAAAGTCCTTCCCGATGGAAGAAGTGCGCATTCAATGGATTCAATGAGAAGCAGTGAATCAAGTCAAAAATACAGTCACCCTTTTCATAAAGTTGATGGTGAAATTTCTTCCAGGGACAGATTCACAGGGGCAAACAACAACAATCCCATTTCTGTAAGGTATAAGAAGTTTGGTATCGACGAGATAAGTAGGCAACGAGATCACCACCGGAGAGACAAGGTGCAGCAGACTATCAGGGAACCGCCTTCCATCGAGATCGGACCAAAGCGGCTTAAAGTCCGAGGCCCCTCATTTTTAAGTTTAGAAAGCAGATTGAATTGA 2547 0.424 MVEGRVRLSKEARNGLEILKRKRLQRAKSVTSTGTSVANMMNRSGGDALRGLASCGVGLHGNADAFSKRKVDKFDTSNLDWIDKIPECPVYSPTKDEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKVGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKTANKVFTRRYCSAGCLPASYLEKEFWQEIGCGKMETVEYACDVDGSAFSSSPSDQLGSSKWNLKKLSRLPKSTLRLLESSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALDFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRIPLLPHEELLCKEAMLLYASMELEDSDISIGLLYQHSIKVSFVNLMRFQHCARWLLMKSRACISVSSHSHGAILCSVCKRDCYVAFVDCSCHLHPVCLRHDIESLDLTCGSKYTLFVREDITDMEAAAKLFEQEDGILPQTQSDQNMYCHPLSNMLRKAKANGYTPYCELKLDSVVEFYTTPEQTTNNQECGTQSQFVFGHGLEYRMPEVPEAATTLCSLSEPLESSSSLKNAEGHGNLKLRSSAFEENGGERTSNNACESSPSPAEYHESSCKPQRDLHRSDVKPFVDNRSDDSDSEMFRVKRPSSLKAERRSANDALTLKHSEQQGLKRLKKVLPDGRSAHSMDSMRSSESSQKYSHPFHKVDGEISSRDRFTGANNNNPISVRYKKFGIDEISRQRDHHRRDKVQQTIREPPSIEIGPKRLKVRGPSFLSLESRLN 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00119 848 MobiDBLite consensus disorder prediction 680 726 - -
Aip05g00119 848 MobiDBLite consensus disorder prediction 742 769 - -
Aip05g00119 848 SMART cupin_9 235 405 IPR003347 -
Aip05g00119 848 MobiDBLite consensus disorder prediction 656 726 - -
Aip05g00119 848 SMART JmjN_1 87 128 IPR003349 -
Aip05g00119 848 MobiDBLite consensus disorder prediction 805 820 - -
Aip05g00119 848 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Aip05g00119 848 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 30 844 - -
Aip05g00119 848 PANTHER LYSINE-SPECIFIC DEMETHYLASE 30 844 - -
Aip05g00119 848 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Aip05g00119 848 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Aip05g00119 848 SUPERFAMILY Clavaminate synthase-like 240 421 - -
Aip05g00119 848 MobiDBLite consensus disorder prediction 657 678 - -
Aip05g00119 848 Pfam C5HC2 zinc finger 484 535 IPR004198 -
Aip05g00119 848 Pfam jmjN domain 89 121 IPR003349 -
Aip05g00119 848 Gene3D Cupin 88 439 - -
Aip05g00119 848 MobiDBLite consensus disorder prediction 805 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00119 Aip-Chr5 1350371 1357196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00119 56 543 JUMONJI Transcription Factor Family AT2G34880 31.738 2.79e-64 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip05g00119 JmjC 2e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00119 - - gmx:100798611 1332.78