Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00118 ATGCTTTTACTCTACTTTATTGCAATATCTAAGGACTCGTATACATCCTTGAACACAAGCATCAACAATTCTAAGAATCTTCCCTTATTGTTGTATTTTGGGTTTGACTCAACTGAACAAACTTTTTCTCCTCAACATAAAAAGAAAGAAGAAGCAGCAAGAATGTATGGGGATTGCCAAGTAATGTCTACAATGGGAGGCAACGTAGTTGTAAACTCATCAGAAACACTTTTCTCTTCTCCGATCCAAAACAACAGCTTCACCTTCATGCCTACCATGCATTTTCATCACTCTTTTCCCACCATGTTGGAACGTGTGTGTTGCCTGACATCAAGATACAGCGGGCGTCCAATCCAAACAATGGCACCAGCACCAGCACTGATGGCCCCATCACTGGACTTGGACATGAACATCTACCCAAGGCACTACGTTGATCCCACCATTCCCCCGTGCACCGAGATGATTCCTGTTCCAATGCTGCCCCCGGAAGCTTCTCAGTTCCCGGAGGGCGGTCTCTTAATGGAAGAGGAGAAGTCTCTGGCCATGGACCTTGCCGCCTCTTCCATGGCCGAGCTTGTCAAGATGTGCCATGCTAACGAGCCGCTTTGGATCCGTGGCTGCGACGGCGATAGGGAAGTTCTTAACTTTGAGGAGCACGGCAGGCTGTTCCCGTGGCCGTTGAATCTCAAGCACCGGACTGACCTCCGGACTGAAGCTAGCCGTGACACCGCTGTTGTCATCATGAATAGTGTCACTCTTGTTGATGCCTTCCTCGATGCTAACAAGTGGATGGAACTGTTTCCCACAATTGTTTCTAGAGCAAAAACGGTCCAAATAATATCTTCAAATGCTTCTGGCCATGCAAGCGGGTCTCTTCAGCTGATGTATGCGGAATTCCAAGTTCTTTCTCCATTGGTATCGACTCGTGAGACTCATTTCCTTCGGTACTGTCAACATAACGCTGAGGAGGGAACGTGGGGCATTGTTGACTTCCCAATCGATAGCTTTCAGCAGAACCTGCACCCTTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGTCTCATTCAAGACATGCCAAATGGATATTCAAGGGTAACATGGATTGAGCATGCAGAAGTAGAAGAGAAACCCGTGCATCAGATATTCAGCAACTATGTTTACAGTGGTATGGCTTTTGGTGCACAGCGGTGGTTGGGTGTTTTGCAGAGACAATGTGAGAGGGTTGCTAGCCTCATGGCCAGAAACATTTCAGATCTTGGAGTGATACACTCACCAGAAGCTAGAAAGAACTTGATGAAACTTGCACAGAGGATGATAAGAACGTTCAGCCTCAACATGAGCACGTCAAGTGGTCAATCATGGACTGCAATATCAGATTCCCCTGAAGATACCGTTAGAATCACCACCAGGAAGATCACAGAGCCTGGTCAACCCAACGGTGTCATTCTGGGTGCTGTTTCAACCACTTGGCTTCCCTATTCCCACACCAAGGTCTTTGATCTGTTACGCGATGAACGCCACAGATCTCAGATGGATGCTCTTTCCAATGGGAATTCACTCAATGAAGTTGCTCACATTGCAAATGGTTCCCATCCAGGAAACTGCATTTCCCTTCTCCGCATAAATGTTGCGAGCAACTCGTCGCAGAACGTGGAGCTAATGCTGCAAGAGAGCTGTACGGACCAATCAGGGAGTGTGGTGGTGTACACTACCATTGCTGTGGACTCCATTCAGGTAGCCATGAGCGGAGAGGATCCTTCATGCATTGCGCTTCTCCCACAAGGTTTCATTATAACGCCAATGCCGCCATCAACCAACAACTCATCCTCTTCTGAAGCTCTTATCAATGAGCATGGCTGCCTCCTCACCGTTGGCCTCCAGATTCTAGCTAGCACCATTCCCTCCGCCAAGCTCAACCTGTCCAGCGTCACCTCCATCACCAACCACCTCTGCAGCACCGTGCACCAGATCGAAGCCTCTCTTTGCAACACCGCCAACAATGAACCAACCACCACCACTGCACCTCCCAAAACAGTCAACTAA 2046 0.4848 MLLLYFIAISKDSYTSLNTSINNSKNLPLLLYFGFDSTEQTFSPQHKKKEEAARMYGDCQVMSTMGGNVVVNSSETLFSSPIQNNSFTFMPTMHFHHSFPTMLERVCCLTSRYSGRPIQTMAPAPALMAPSLDLDMNIYPRHYVDPTIPPCTEMIPVPMLPPEASQFPEGGLLMEEEKSLAMDLAASSMAELVKMCHANEPLWIRGCDGDREVLNFEEHGRLFPWPLNLKHRTDLRTEASRDTAVVIMNSVTLVDAFLDANKWMELFPTIVSRAKTVQIISSNASGHASGSLQLMYAEFQVLSPLVSTRETHFLRYCQHNAEEGTWGIVDFPIDSFQQNLHPSYPRYCRRPSGCLIQDMPNGYSRVTWIEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIHSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSVVVYTTIAVDSIQVAMSGEDPSCIALLPQGFIITPMPPSTNNSSSSEALINEHGCLLTVGLQILASTIPSAKLNLSSVTSITNHLCSTVHQIEASLCNTANNEPTTTTAPPKTVN 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00118 681 PANTHER - 103 668 - -
Aip05g00118 681 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 668 IPR042160 -
Aip05g00118 681 ProSiteProfiles START domain profile. 174 411 IPR002913 GO:0008289
Aip05g00118 681 SMART START_1 183 408 IPR002913 GO:0008289
Aip05g00118 681 Pfam START domain 184 408 IPR002913 GO:0008289
Aip05g00118 681 Gene3D - 235 397 IPR023393 -
Aip05g00118 681 SUPERFAMILY Bet v1-like 175 410 - -
Aip05g00118 681 CDD START_ArGLABRA2_like 178 407 - -
Aip05g00118 681 SUPERFAMILY Bet v1-like 426 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00118 Aip-Chr5 1328172 1331932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00118 103 665 Homeobox Transcription Factor Family AT5G46880 59.259 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00118 - - aip:107639924 1069.3