Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00089 ATGGGTGCTGGGGGTCCAGATGAAGAGGATAACAGGTGGCCACCATGGTTGAAGCCACTGCTGAAGGAGAGCTTCTTTGTTCAATGCAAGCTACACGCTGATTCCCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATGAACGGCGCTCTCTGCTCTCTGTGTCTCGCTTACCACAAGGATCATCGTGCTATTCAGATAAGGAGGTCTTCATATCATGATGTGATAAGGGTGAATGAGATCCAGAAGGTGTTGGACATCACTGGTGTTCAGACCTACATTATCAACAGCGCAAGGGTTGTCTTCCTCAACGAGAGGCCTCAGCCAAGGCCTGGAAAAGGTGTCACTAACACCTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTACCGCTTCTGTTCTCTCGGTTGCAAGATTGTTGGAACATCGAAGAACTTCCAGAAGAGGAAGAAACATTCAGCGGCAATGGCATCAGATTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGCCGCCACAACAACAGTAACCAAGTCCAGAGTTTCACACCGTCCACACCGCCCCCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGAGCCCCAATGGGAGGAGGACTAATCATAGAATACTAA 657 0.4916 MGAGGPDEEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKRKKHSAAMASDSEDSYSSNSSHGRHNNSNQVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGGLIIEY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00089 218 MobiDBLite consensus disorder prediction 159 194 - -
Aip05g00089 218 MobiDBLite consensus disorder prediction 149 218 - -
Aip05g00089 218 Pfam PLATZ transcription factor 69 140 IPR006734 -
Aip05g00089 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 213 - -
Aip05g00089 218 PANTHER - 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00089 Aip-Chr5 1036573 1039136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip05g00089 PLATZ 5.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00089 - - ahf:112747407 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00089 05 1036573 1039136 Aip05g00089 05 1036573 1039136 ECH