Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00075 ATGGGAGACGTGGCTAAGGACCTAACAGCAGGAACTATTGGAGGGGCAGCACAATTGATATGTGGCCACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAGGTTCCCAAGTATGCTGGTGCAATTGATGCTGTGAAGCAGACAATAGCAGCCGAAGGACCAAGGGGTTTGTACAAAGGTATGGGAGCCCCGCTTGCTACCGTAGCTGCCTTCAACGCTGTCCTGTTTTCAGTAAGGGGACAACTGGAGGCATTATTGAGGTCCGAACCTGGTGCTCCTCTCACAGTAAACCAGCAGATTGTTTGTGGCGCCGGAGCCGGAGTTGCGGTTTCTGTTCTAGCTTGCCCCACTGAATTGGTCAAATGCAGGTTGCAAGCACAAAGTGCTCTTGCTGGTTCTGGAGTTGCTACCCTGGCCGTGAAATATGGAGGACCTATGGATGTGGCCAGACAAGTTCTTCGGTCAGAAGGAGGCGTAAAAGGTCTTTTCAAGGGCTTGGTTCCTACAATGGCGCGTGAAATACCTGGAAATGCTGCAATGTTTGGAGTATATGAAGCAACTAAGCAATTACTCGCAGGAGGACGTGATACCTCTGGACTAGGTAGAGGTTCTCTGGTGGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCATGGTATACCCAACCGACGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTACAATTGATGCTTTCAGAAAGATTCGCTCCACCGAAGGAGTCAAAGGACTGTATAAGGGTTTTGGTCCGGCGATGGCCCGAAGTGTTCCTGCAAATGCAGCTTGTTTCTTGGCATATGAGATGACACGATCAGCTCTAGGATGA 894 0.4978 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPTPLPGQVPKYAGAIDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQLEALLRSEPGAPLTVNQQIVCGAGAGVAVSVLACPTELVKCRLQAQSALAGSGVATLAVKYGGPMDVARQVLRSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEATKQLLAGGRDTSGLGRGSLVVAGGLAGASFWFMVYPTDVVKSVIQVDDYKNPKFSGTIDAFRKIRSTEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00075 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Aip05g00075 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Aip05g00075 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Aip05g00075 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Aip05g00075 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Aip05g00075 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Aip05g00075 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Aip05g00075 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Aip05g00075 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Aip05g00075 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00075 Aip-Chr5 864608 866779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00075 22 291 Antiporters AT1G79900 33.700 1.17e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00075 K15109 - gmx:100781634 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00075 05 864608 866779 Aip05g00075 05 864608 866779 ECH