Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00062 ATGGCTCCTCCGCCACCCAATGGTTATCGTCACGAAACGGTGGTTGACATAAAGAACAGCAACAAGACCACTCAACAAATAGTGGGTTTCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACTGTGAGCAAGAAGTTGAAGGTAGAGGGAAAGTGGTCCAGTGAAGACGTGGACTTACTCCACGACATCACTGGCTATGCACCGAAGGGGTGCATCACGGCAGTGATGGGGCCCAGCGGTGCCGGAAAGTCGACGTTCTTGGACGGACTTGCTGGGAGGATCAAGAGTGGGAGCCTGAAAGGAAGGGTTTCATTAGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCACTCTCTCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAGGGAACAAGAGGAGTTTCGGGCGGAGAGCGGCGGAGGGTGTCAATAGGAGTGGACATCATCCATGGACCGTCCCTTCTCTTCCTAGACGAGCCAACCTCGGGGCTGGACTCCACAAGCGCACACAGTGTGATCGAAAAGGTTCACGACATTGCACGCAGCGGCAGCACCGTCATTCTCACCATCCATCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATCCTCGCCAGGGGCCAGCTCATGTTTCAAGGCTCACCTAATGACGTCACACAACATTTGACTCGCATGTCCCGCAGGGTGCCAAAGGGTGAGAACCCTATCGAACATCTGATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACCGGAATGAAGCCCCCTCCGTTGAAGGAGGGTGTGTCTGTCGAGCCGTCGCCGTCGCCGGTGAGGTCATCGCATAGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTGTCTGGGACGTCTCAGGTGAGTAGGAGAGTTGCAGATGAGTATGATCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGCACCCACAGTGCTACGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAAAGAGTCCAAGCCACACAATAATCCTGGAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGTGAGATTCTGGCAGCGACACCAACTCCTCACAGCAGCGACTATACTGTGAACGAAAACGACTATCTCACCCCAACAACTGGCGCCGCCATGCCGGAGCACCTGGCTCCAAAATTCACCAACTCCTTCTTCTCGGAAACCTGGATCCTGATGCGGCGCAACTTCATCAACATCCGAAGAACTCCGGAGCTGTTCCTGTCGCGCCTCATGGTACTCACCATCATGGGCTTTATGATGGCAACAATGTTCCACAACCCTAAACAGAATCTCCAGGGAATCACCAATCGCCTCAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGATGCCGTCCCCGCCTTCATTCAAGAACGCTTCATCTTCATCAGAGAAACCTCTCACAACGCCTACAGAGCCTCTTCCTACACCATCGCCAGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCCGCCATTGTTTGGTTTGCCCTAACCCTGAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATAAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCTGCTGTTATTGCTTTCACTGCCTTGTTCTTCTTGTTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTATTGGCGGTGGATGAACAAGATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGGCACACCAATGAGCTAAGTAATTGTTTATTTGATGATATATAA 2076 0.5034 MAPPPPNGYRHETVVDIKNSNKTTQQIVGFSGGLEFWNLTYTVSKKLKVEGKWSSEDVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRVSLDGASVSASLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMFQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPPLKEGVSVEPSPSPVRSSHRRGYEEKSLEVSGTSQVSRRVADEYDHSLRSPYNKNSQSWSSTHSATFLKFTPSRLRNKESKPHNNPGRHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPTTGAAMPEHLAPKFTNSFFSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIASLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHTNELSNCLFDDI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00062 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 681 - -
Aip05g00062 691 Pfam ABC-2 type transporter 241 298 IPR043926 GO:0140359
Aip05g00062 691 SMART AAA_5 70 269 IPR003593 -
Aip05g00062 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 284 IPR003439 GO:0005524
Aip05g00062 691 MobiDBLite consensus disorder prediction 392 413 - -
Aip05g00062 691 Pfam ABC transporter 61 212 IPR003439 GO:0005524
Aip05g00062 691 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Aip05g00062 691 MobiDBLite consensus disorder prediction 316 359 - -
Aip05g00062 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 10 681 - -
Aip05g00062 691 Pfam ABC-2 type transporter 466 671 IPR013525 GO:0016020|GO:0140359
Aip05g00062 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 278 IPR027417 -
Aip05g00062 691 CDD ABCG_EPDR 34 266 - -
Aip05g00062 691 Gene3D - 42 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00062 Aip-Chr5 697965 700841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00062 54 362 Calmodulin-binding Proteins AT2G36910 25.321 5.28e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00062 K05681 - gmx:100804809 1041.18