Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00061 ATGATGGATTTACAAGATTATTGGATATTAAGATTGGTTTTTGTTGTATATGTTCTTTGTGTCTACATATTTATCAGATCAGCTTCTGCAAGTGAAGGGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTATACAGATCCAGTGACCACCTTAAATTACACAACAGATTACAGTTCTTTCCCTGACAAGAAAATGTATCTGATAAGAGGCACATTTCCCTTTAAGAATTCATCAAATTCTTTCTTTGATGTTTCAGTAGGAGTAACTCAATTAAGCAGAGTGAGATCATTCGGGTCTCAGGACTTAGAAATAGAGGGAGCTTTCAGGGCCACACAAAACTTCACAGACTTCTGCTTAGTGAAAAGGGTGGGTAGTCCCTATATTTCGCAGCTCGAATTAAGGCCACTTCATGAAGAGTACCTGCAAGGTTTACCTGCTAGTCTTCTGAAACTGATAACCAGAAATAACCTTGGAGGCAACATCAGTTTCAGGTACCCTGTTGACAAGAGTGATAGAATATGGAAAGAAACTTCAAGTCCATCATCATCAGCTCTTGCATTATCTTTAAACATCACCAATTTTGATCCCAAAAATAGTATCTTCCCTCCCCTGCAAGTCCTACAAACTGCTCTTACCCACTCTGAGAGGTTGGAGTTCATCCACAATGGCCTCAACACCACGGATTATGAATACCACGTGTTTCTCTACTTCCTTGAATCAAATGGTACTCTCAAAGCAGGACAAAGAGTGTTTGACATCTTTGTTAACAGTGAGATCAAAGAGGGAAGATTTGACATATTGAATGGAGGGTCCAACTACAGATACACTGTCTTAAATGTATCAGCAAAAGGATCATTGAACCTAACCTTGGCCAAGGCATCTGGTTCCGAGAATGGACCACTTCTGAATGCTTATGAGATCATGCAGGTACACCCATGGATTGAAGGGACCAACCAAACAGATGTGGAAGTGATTAAAAAGGTAAGAGAACAGTTATTGGTGCAAAACCAAGACAATAAAGTGCTGAAGAGTTGGAGTGGAGACCCTTGTATTCTTTCCCCATGGCATGGAATAACATGTGATCATTCAAGTGGTCCATCTGTTATCACTGCTTTGGATCTTTCCTCCAGTGATCTCAAAGGACCAATTCCTTCCAGTGTCACTGAGATGACCAACTTGAGAACACTGAACCTGAGCCACAATAGCTTCACTGGTGAAATCCCCTCCTCATTTCCGCTTTCTTCCTTGTTGACATCAATAGATGTGAGTTACAATGACTTAGAGGGATCCCTTCCAGAATCCATTTCCTCACTGCCAAATTTAAAAACACTATATTTTGGTTGCAATGAACATTTGAAGGAAGACATTCCACCAAAATTGAGCAGTTCACTAATCCAGACAGATGGCGGAAGATGCAAGGAAGAAGACTCCAGACTTGATCAAGTAGTGGTTATTAGTGTGGTTACATGTGGATCACTATTGATTACTTTGGCTATTGGAGTTATTTTTGTTTGCCGTTATAGACATAAACTAATTCCATGGGAAGGATTTGTTGGAAAGAGATACCCAGTGACAACAAACTTAATTTTCTCTTTGCCAAGCAAAGATGACTTCTTCATAAAGTCTGTGTCAATTCAAGCATTCACTTTGGAATATATAGAGGAGGCAACAGAGAAGTACAAGACGTTGATAGGTGAGGGAGGGTTTGGTCCAGTTTACCGGGGCATGCTAGACGATGATCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACGTCGACTCAGGGAACTCGAGAATTTGACAATGAGCTAAACCTACTCTCTGCAATACAGCATGAGAACCTTGTGCCTCTTATTGGTTACTGCAATGAAAAGGATCAACAGATTCTCGTGTACCCTTTTATGTCCAATGGCTCTTTGCAGAATAGACTATATGGGGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACCAGACTCTCAGTCGCACTTGGTGCAGCTCGAGCAGGGTTGGCATATCTTCACACATTTCCGGGACGTCCTGTAATACACAGGGACATAAAATCTAGCAATATACTCCTGGATCATAGCATGTGTGCAAAGGTTGCAGATTTTGGGTTCTCAAAATATGCTCCACAGGAAGGAGACAGTAATGTTTCACTTGAAGTAAGAGGAACTGCGGGCTATTTGGATCCAGAGTACTATACAACCCAACAGCTATCGGAAAAGAGTGATGTCTTCAGCTTTGGTGTGGTCCTACTTGAAATTGTGAGTGGTCGAGAACCTCTCGACATAAAGAGGCCACGAAATGAGTGGAGCTTGGTTGAATGGGCCAAGCCATACATAAGAGCATCAAAGATAGAGGAAATTGTGGATCCTGGAATCAAGGGAGGATACCATGCAGAAGCAATGTGGAGAGTGGTGGAAGTGGCACTGCAATGTATTGAACCATTCTCCGCATACAGGCCATGCATGGATGACATTGTCCGCGAGTTGGAGGATGCTCTGATCATAGAAAACAATGCATCGGAATACATGAAGTCCATAGACAGCCTCGGAGGATCGAACCGCTACTCTTTCGTCATGGATAAGAGGGTTCTGCCCTCTACTTCATCTACTGCAGAATCTACCATCACATCACAAACCTTGTCCCTCCCACAACCAAGATAG 2670 0.4225 MMDLQDYWILRLVFVVYVLCVYIFIRSASASEGFESIACCADSNYTDPVTTLNYTTDYSSFPDKKMYLIRGTFPFKNSSNSFFDVSVGVTQLSRVRSFGSQDLEIEGAFRATQNFTDFCLVKRVGSPYISQLELRPLHEEYLQGLPASLLKLITRNNLGGNISFRYPVDKSDRIWKETSSPSSSALALSLNITNFDPKNSIFPPLQVLQTALTHSERLEFIHNGLNTTDYEYHVFLYFLESNGTLKAGQRVFDIFVNSEIKEGRFDILNGGSNYRYTVLNVSAKGSLNLTLAKASGSENGPLLNAYEIMQVHPWIEGTNQTDVEVIKKVREQLLVQNQDNKVLKSWSGDPCILSPWHGITCDHSSGPSVITALDLSSSDLKGPIPSSVTEMTNLRTLNLSHNSFTGEIPSSFPLSSLLTSIDVSYNDLEGSLPESISSLPNLKTLYFGCNEHLKEDIPPKLSSSLIQTDGGRCKEEDSRLDQVVVISVVTCGSLLITLAIGVIFVCRYRHKLIPWEGFVGKRYPVTTNLIFSLPSKDDFFIKSVSIQAFTLEYIEEATEKYKTLIGEGGFGPVYRGMLDDDQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLIGYCNEKDQQILVYPFMSNGSLQNRLYGEPAKRKILDWPTRLSVALGAARAGLAYLHTFPGRPVIHRDIKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYTTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYIRASKIEEIVDPGIKGGYHAEAMWRVVEVALQCIEPFSAYRPCMDDIVRELEDALIIENNASEYMKSIDSLGGSNRYSFVMDKRVLPSTSSTAESTITSQTLSLPQPR 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00061 889 SUPERFAMILY L domain-like 341 462 - -
Aip05g00061 889 Gene3D Ribonuclease Inhibitor 322 473 IPR032675 -
Aip05g00061 889 Pfam Malectin-like domain 63 311 IPR024788 -
Aip05g00061 889 CDD STKc_IRAK 565 833 - -
Aip05g00061 889 Pfam Protein tyrosine and serine/threonine kinase 562 832 IPR001245 GO:0004672|GO:0006468
Aip05g00061 889 SUPERFAMILY Protein kinase-like (PK-like) 539 832 IPR011009 -
Aip05g00061 889 Gene3D Transferase(Phosphotransferase) domain 1 635 849 - -
Aip05g00061 889 Gene3D Phosphorylase Kinase; domain 1 533 634 - -
Aip05g00061 889 ProSiteProfiles Leucine-rich repeat profile. 393 415 IPR001611 GO:0005515
Aip05g00061 889 SMART serkin_6 559 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00061 889 Gene3D - 151 312 - -
Aip05g00061 889 PANTHER OS05G0525400 PROTEIN 90 850 - -
Aip05g00061 889 PANTHER OS07G0107800 PROTEIN-RELATED 90 850 - -
Aip05g00061 889 ProSiteProfiles Protein kinase domain profile. 559 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00061 889 Pfam Leucine Rich Repeat 393 412 IPR001611 GO:0005515
Aip05g00061 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00061 Aip-Chr5 686643 692861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00061 18 839 Receptor kinase-like Gene Family AT1G67720 33.408 2.81e-123 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip05g00061 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00061 - - aip:107642298 1717.98